RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ZBP1Q9H171 429 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 SDCBP2Q9H190 292 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 IMPACTQ9P2X3 320 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 CAPN11Q9UMQ6 739 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 PLXNA4Q9HCM2 1894 aa17.97■□□□□ 0.47
CCM2-205ENST00000472223 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.96■□□□□ 0.47
CCM2-205ENST00000472223 GRM6O15303 877 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 MED7O43513 233 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 EFEMP2O95967 443 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 PAEPP09466 180 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 CPB1P15086 417 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 FERP16591 822 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 SOX5P35711 763 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 ARPP19P56211 112 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 SMARCB1Q12824 385 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 MRPL58Q14197 206 aaKnown RBP17.96■□□□□ 0.47
CCM2-205ENST00000472223 SFMBT2Q5VUG0 894 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 PLPP4Q5VZY2 271 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 CNGA4Q8IV77 575 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 RBBP8NLQ8NC74 664 aaPredicted RBP17.96■□□□□ 0.47
CCM2-205ENST00000472223 LNX1Q8TBB1 728 aaPredicted RBP17.96■□□□□ 0.47
CCM2-205ENST00000472223 SHC3Q92529 594 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 KAT5Q92993 513 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 SYT15Q9BQS2 421 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 VN1R3Q9BXE9 311 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 FNIP2Q9P278 1114 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 MTRRQ9UBK8 725 aa17.96■□□□□ 0.47
CCM2-205ENST00000472223 ATP8B3O60423 1300 aa17.96■□□□□ 0.46
CCM2-205ENST00000472223 AKR1B15C9JRZ8 316 aaPredicted RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 F8VZ95 297 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 FOXN3O00409 490 aaPredicted RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 EPHB6O15197 1021 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 CSPG5O95196 566 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 ADH1AP07327 375 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 CD19P15391 556 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 PTPN1P18031 435 aaKnown RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 ACAT1P24752 427 aaKnown RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 CASP14P31944 242 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 KRT9P35527 623 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 NDUFV1P49821 464 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 ASIC2Q16515 512 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 NFE2Q16621 373 aaPredicted RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 DPY19L2P1Q6NXN4 242 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 ELMSAN1Q6PJG2 1045 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 PRSS55Q6UWB4 352 aaPredicted RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 C4orf50Q6ZRC1 276 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 ACOT1Q86TX2 421 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 MRPL43Q8N983 215 aaKnown RBP17.95■□□□□ 0.46
CCM2-205ENST00000472223 PDCL3Q9H2J4 239 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 CDY1Q9Y6F8 540 aa17.95■□□□□ 0.46
CCM2-205ENST00000472223 VWA8A3KMH1 1905 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 GFPT2O94808 682 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 VDRP11473 427 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 ACO1P21399 889 aaKnown RBP17.94■□□□□ 0.46
CCM2-205ENST00000472223 LMO2P25791 158 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 KLRC2P26717 231 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 OR1D2P34982 312 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 PDE6CP51160 858 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 SLC8A3P57103 927 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 ERVFC1P60507 584 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 ARID5AQ03989 594 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 STILQ15468 1287 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 PTPN14Q15678 1187 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 SGO2Q562F6 1265 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 INTS6LQ5JSJ4 861 aaKnown RBP17.94■□□□□ 0.46
CCM2-205ENST00000472223 SPRED2Q7Z698 418 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 OSTM1Q86WC4 334 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 SPATA2LQ8IUW3 424 aaPredicted RBP17.94■□□□□ 0.46
CCM2-205ENST00000472223 FAM71AQ8IYT1 594 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 CRYBG2Q8N1P7 616 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 SPC24Q8NBT2 197 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 B3GALNT2Q8NCR0 500 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 OR8K1Q8NGG5 319 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 GDPD5Q8WTR4 605 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 MED10Q9BTT4 135 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 CNTN6Q9UQ52 1028 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 IRAK3Q9Y616 596 aa17.94■□□□□ 0.46
CCM2-205ENST00000472223 LRRC53A6NM62 1247 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 CYP26A1O43174 497 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 GYPCP04921 128 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 GNA15P30679 374 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 ELF1P32519 619 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 RAD23BP54727 409 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 JAM2P57087 298 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 CYP27A1Q02318 531 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 SLC39A12Q504Y0 691 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 UBR7Q8N806 425 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 MYCBPAPQ8TBZ2 947 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 C2orf15Q8WU43 125 aaKnown RBP17.93■□□□□ 0.46
CCM2-205ENST00000472223 AUTS2Q8WXX7 1259 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 SYN2Q92777 582 aaPredicted RBP17.93■□□□□ 0.46
CCM2-205ENST00000472223 MRPL38Q96DV4 380 aaKnown RBP17.93■□□□□ 0.46
CCM2-205ENST00000472223 TTYH3Q9C0H2 523 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 ZCWPW1Q9H0M4 648 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 RXFP1Q9HBX9 757 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 HESX1Q9UBX0 185 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
CCM2-205ENST00000472223 BZW2Q9Y6E2 419 aaKnown RBP17.93■□□□□ 0.46
CCM2-205ENST00000472223 THAP12O43422 761 aa17.92■□□□□ 0.46
CCM2-205ENST00000472223 DNAJB1P25685 340 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms