RNA–Protein interactions for RNA: ENST00000471894.1

PUM1-208, Transcript of pumilio RNA binding family member 1, human

TSL 3

Gene PUM1, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PUM1-208	ENST00000471894	SLC39A11	Q8N1S5	342 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	SLC20A1	Q8WUM9	679 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	BCL7C	Q8WUZ0	217 aa	Predicted RBP	11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	ZNF606	Q8WXB4	792 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	TMEM169	Q96HH4	297 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	TNIP3	Q96KP6	325 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	TWNK	Q96RR1	684 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	PDCL3	Q9H2J4	239 aa		11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	SEPT11	Q9NVA2	429 aa	Known RBP	11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	EPN1	Q9Y6I3	576 aa	Predicted RBP	11.22	□□□□□ -0.61
PUM1-208	ENST00000471894	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.22	□□□□□ -0.61	4e-7	■■■■□ 24.1
PUM1-208	ENST00000471894	LCHN	A4D1U4	455 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	MED7	O43513	233 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	HCRT	O43612	131 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	MME	P08473	750 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	PTPN1	P18031	435 aa	Known RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	FGFR3	P22607	806 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	ACAT1	P24752	427 aa	Known RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	BRD2	P25440	801 aa	Known RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	PCSK1	P29120	753 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	PPM1A	P35813	382 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	RGS19	P49795	217 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	CDR2	Q01850	454 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	KRT17	Q04695	432 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	MTF1	Q14872	753 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	SGO2	Q562F6	1265 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	RAD9B	Q6WBX8	426 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	TAS1R1	Q7RTX1	841 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	ZNF677	Q86XU0	584 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	CRYBG2	Q8N1P7	616 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	SP7	Q8TDD2	431 aa	Predicted RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	EPS8L1	Q8TE68	723 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	TFAP2B	Q92481	460 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	CLP1	Q92989	425 aa	Known RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	DPEP3	Q9H4B8	488 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	ADAMTS1	Q9UHI8	967 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	NOCT	Q9UK39	431 aa	Known RBP	11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	CDH9	Q9ULB4	789 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	NME7	Q9Y5B8	376 aa		11.21	□□□□□ -0.61
PUM1-208	ENST00000471894	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894		H7C4K7	107 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	ATP2C2	O75185	946 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	OAZ2	O95190	189 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	NDUFA10	O95299	355 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	IPO7	O95373	1038 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	MYOG	P15173	224 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	CHRNB2	P17787	502 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	ANXA13	P27216	316 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	SSTR3	P32745	418 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	BMPR1A	P36894	532 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	KIF11	P52732	1056 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	PSMC1	P62191	440 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	GFPT1	Q06210	699 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	BMS1	Q14692	1282 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	SPA17	Q15506	151 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	CNGA2	Q16280	664 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	ASTE1	Q2TB18	679 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	USP41	Q3LFD5	358 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	CTXN3	Q4LDR2	81 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	VARS2	Q5ST30	1063 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	FAM109B	Q6ICB4	259 aa	Predicted RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	KIAA1841	Q6NSI8	718 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	DDX53	Q86TM3	631 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	GLYCTK	Q8IVS8	523 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	C12orf29	Q8N999	325 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	B3GALNT2	Q8NCR0	500 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	DDX1	Q92499	740 aa	Known RBP	11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	CYFIP2	Q96F07	1278 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	B3GALT6	Q96L58	329 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	LPIN3	Q9BQK8	851 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	SYT15	Q9BQS2	421 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	ACBD6	Q9BR61	282 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	TTPAL	Q9BTX7	342 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	SPTLC3	Q9NUV7	552 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894	RWDD3	Q9Y3V2	267 aa		11.2	□□□□□ -0.62
PUM1-208	ENST00000471894		A0A087X0T9	212 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	LINC01553	A4QN01	128 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	EIF3CL	B5ME19	914 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	DDX3X	O00571	662 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	FGF18	O76093	207 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	EFEMP2	O95967	443 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	LINC00271	P0C7V0	271 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	FAM228B	P0C875	321 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	BMP8B	P34820	402 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	CTNNB1	P35222	781 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	TSPY1	Q01534	308 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	FMO1	Q01740	532 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	MRPL58	Q14197	206 aa	Known RBP	11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	STIL	Q15468	1287 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	SLC18A3	Q16572	532 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	CCDC122	Q5T0U0	273 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	KIAA0319	Q5VV43	1072 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	TRIM72	Q6ZMU5	477 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	ANKS3	Q6ZW76	656 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	VPS52	Q8N1B4	723 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	KLHL23	Q8NBE8	558 aa		11.19	□□□□□ -0.62
PUM1-208	ENST00000471894	SLC30A5	Q8TAD4	765 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms