RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 RARBP10826 455 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 MTX3Q5HYI7 312 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 TEDDM1Q5T9Z0 273 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF425Q6IV72 752 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 VGLL2Q8N8G2 317 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 TNPO1Q92973 898 aaKnown RBP4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 ETAA1Q9NY74 926 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 DKK3Q9UBP4 350 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF70Q9UC06 446 aaPredicted RBP4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 SERPINB13Q9UIV8 391 aa4.49□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF804BA4D1E1 1349 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 LINC01548A6NM66 108 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 ALG1L2C9J202 215 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 NT5C1B-RDH14C9J2C7 533 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC16A6O15403 523 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 KATNA1O75449 491 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 KIF20AO95235 890 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 CHRM3P20309 590 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 KELP23276 732 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 PRDX5P30044 214 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 EIF2B5Q13144 721 aaKnown RBP4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 FAM50AQ14320 339 aaKnown RBP4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 KIF22Q14807 665 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC44A4Q53GD3 710 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SFRP4Q6FHJ7 346 aaPredicted RBP4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 C1QL2Q7Z5L3 287 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 CPA6Q8N4T0 437 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 FANCBQ8NB91 859 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 C1orf43Q9BWL3 253 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SEMA4CQ9C0C4 833 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 WDCPQ9H6R7 721 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 NRIP3Q9NQ35 241 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SH3BP4Q9P0V3 963 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 ZDHHC8Q9ULC8 765 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 SPEF1Q9Y4P9 236 aa4.48□□□□□ -1.69
PRPF40A-207ENST00000471701 LRRC14BA6NHZ5 514 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 PRSS29PA6NIE9 313 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 QSOX1O00391 747 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 DTNBO60941 627 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 PRR35P0CG20 571 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 PDCP20941 246 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 DRD4P21917 467 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 CERS1P27544 350 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 GCLCP48506 637 aaPredicted RBP4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 TFF2Q03403 129 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 ODF1Q14990 250 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 AMOTQ4VCS5 1084 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 ZNF618Q5T7W0 954 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 ICE2Q659A1 982 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 ANKRD16Q6P6B7 361 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 LAYNQ6UX15 382 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC29A4Q7RTT9 530 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 SLC13A1Q9BZW2 595 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 BHMT2Q9H2M3 363 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 ABCF2Q9UG63 623 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 AGAP1Q9UPQ3 857 aa4.47□□□□□ -1.69
PRPF40A-207ENST00000471701 SBNO2Q9Y2G9 1366 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 PROB1E7EW31 1015 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 FZD9O00144 591 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 PPM1DO15297 605 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 TLR5O60602 858 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 ITGB6P18564 788 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 CCDC157Q569K6 752 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 FAM160B1Q5W0V3 765 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF782Q6ZMW2 699 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 HEATR3Q7Z4Q2 680 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 WDR53Q7Z5U6 358 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 DTX2Q86UW9 622 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 FAM90A1Q86YD7 464 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 KLHDC4Q8TBB5 520 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 TBC1D5Q92609 795 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 TINAGL1Q9GZM7 467 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 FEZ2Q9UHY8 353 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 TNKSO95271 1327 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 WASHC2CQ9Y4E1 1318 aa4.46□□□□□ -1.7
PRPF40A-207ENST00000471701 M0QYG6 137 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 SLC16A3O15427 465 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 SNUPNO95149 360 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 ONECUT2O95948 504 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 FTLP02792 175 aaPredicted RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 CYP2D6P10635 497 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 CYP2C18P33260 490 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 PTGER1P34995 402 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 FXR1P51114 621 aaKnown RBP eCLIP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 HK3P52790 923 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 PDE1AP54750 535 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 EEFSECP57772 596 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 NOGQ13253 232 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 AARS2Q5JTZ9 985 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 PCID2Q5JVF3 399 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 VPS53Q5VIR6 699 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 TMEM108Q6UXF1 575 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF804AQ7Z570 1209 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 ZNF366Q8N895 744 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 FAM46DQ8NEK8 389 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 RPL36ALQ969Q0 106 aaKnown RBP4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 RGMAQ96B86 450 aa4.45□□□□□ -1.7
PRPF40A-207ENST00000471701 MRPL46Q9H2W6 279 aaKnown RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms