RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 LTB4R2Q9NPC1 389 aa16.54■□□□□ 0.24
COL1A1-203ENST00000471344 NUP210Q8TEM1 1887 aaPredicted RBP16.54■□□□□ 0.24
COL1A1-203ENST00000471344 FAM170BA6NMN3 283 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 HEPACAM2A8MVW5 462 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 CLIC2O15247 247 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 EIF3DO15371 548 aaKnown RBP eCLIP16.53■□□□□ 0.24
COL1A1-203ENST00000471344 GABRR2P28476 465 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 GDI1P31150 447 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 SDHAF4Q5VUM1 108 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 MAML2Q8IZL2 1156 aaPredicted RBP16.53■□□□□ 0.24
COL1A1-203ENST00000471344 THEM5Q8N1Q8 247 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 ZNF507Q8TCN5 953 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 FAM200AQ8TCP9 573 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 SCFD1Q8WVM8 642 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 LRRC3BQ96PB8 259 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 TRMT61BQ9BVS5 477 aaKnown RBP16.53■□□□□ 0.24
COL1A1-203ENST00000471344 BRD9Q9H8M2 597 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 TRPV4Q9HBA0 871 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 IL21Q9HBE4 155 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 AGPAT3Q9NRZ7 376 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 INTS13Q9NVM9 706 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 ITGA11Q9UKX5 1188 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 ZDHHC9Q9Y397 364 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 R4GN57 208 aa16.53■□□□□ 0.24
COL1A1-203ENST00000471344 OBSL1O75147 1896 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 CACNA1IQ9P0X4 2223 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 PRAMEF12O95522 483 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 TMEM191BP0C7N4 346 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 HAPLN1P10915 354 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-203ENST00000471344 PSMC3P17980 439 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 PNPLA4P41247 253 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 CYP2J2P51589 502 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 AMPD3Q01432 767 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 UNC13DQ70J99 1090 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 C1orf210Q8IVY1 113 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 LRRC52Q8N7C0 313 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 RDH13Q8NBN7 331 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 CACTINQ8WUQ7 758 aaKnown RBP16.52■□□□□ 0.24
COL1A1-203ENST00000471344 PKMYT1Q99640 499 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 PI4K2AQ9BTU6 479 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 LRRC27Q9C0I9 530 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 SMG9Q9H0W8 520 aaKnown RBP16.52■□□□□ 0.24
COL1A1-203ENST00000471344 ATXN3LQ9H3M9 355 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 SLC39A2Q9NP94 309 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 DDX43Q9NXZ2 648 aaKnown RBP16.52■□□□□ 0.24
COL1A1-203ENST00000471344 SERTAD1Q9UHV2 236 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 SNX9Q9Y5X1 595 aa16.52■□□□□ 0.24
COL1A1-203ENST00000471344 ZNF233A6NK53 670 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 ARNTLO00327 626 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 ACTN4O43707 911 aaKnown RBP16.51■□□□□ 0.23
COL1A1-203ENST00000471344 FZD5Q13467 585 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 GPR158Q5T848 1215 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 STXBP4Q6ZWJ1 553 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 ARID3BQ8IVW6 561 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-203ENST00000471344 DNASE1L2Q92874 299 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 ZFYVE19Q96K21 471 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 GZF1Q9H116 711 aaPredicted RBP16.51■□□□□ 0.23
COL1A1-203ENST00000471344 FAM13BQ9NYF5 915 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 HSFX1Q9UBD0 423 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 RCOR1Q9UKL0 485 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
COL1A1-203ENST00000471344 ASB3Q9Y575 518 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 DMXL1Q9Y485 3027 aa16.51■□□□□ 0.23
COL1A1-203ENST00000471344 HUS1O60921 280 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SP9P0CG40 484 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 HMGA1P17096 107 aaKnown RBP16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SOX9P48436 509 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 TUFMP49411 452 aaKnown RBP16.5■□□□□ 0.23
COL1A1-203ENST00000471344 RBP5P82980 135 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SNRNP35Q16560 246 aaKnown RBP16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SOWAHAQ2M3V2 549 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 TMEM150AQ86TG1 271 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 ITIH5Q86UX2 942 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 MFSD6LQ8IWD5 586 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 ADGRF2Q8IZF7 708 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 ZNF687Q8N1G0 1237 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SPPL2BQ8TCT7 592 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 KBTBD7Q8WVZ9 684 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 NKD2Q969F2 451 aaPredicted RBP16.5■□□□□ 0.23
COL1A1-203ENST00000471344 ANKRD36BP1Q96IX9 119 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 MAGEF1Q9HAY2 307 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 SPATA6Q9NWH7 488 aaPredicted RBP16.5■□□□□ 0.23
COL1A1-203ENST00000471344 GDAP2Q9NXN4 497 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 GTF3C4Q9UKN8 822 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 PCDHB5Q9Y5E4 795 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 DENND4CQ5VZ89 1909 aa16.5■□□□□ 0.23
COL1A1-203ENST00000471344 UBE4BO95155 1302 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 A0A1B0GVL5 298 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 ZNF263O14978 683 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 KIAA0391O15091 583 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 KLRC4O43908 158 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 ATP2C2O75185 946 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 DLATP10515 647 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 PFKFB1P16118 471 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 CYP2F1P24903 491 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 PSMC1P62191 440 aaKnown RBP16.49■□□□□ 0.23
COL1A1-203ENST00000471344 TSPY1Q01534 308 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 CYP24A1Q07973 514 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 VEPH1Q14D04 833 aa16.49■□□□□ 0.23
COL1A1-203ENST00000471344 DDR2Q16832 855 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms