RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 HK3P52790 923 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 NXPH1P58417 271 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 NHLH1Q02575 133 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ITIH3Q06033 890 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PTPRRQ15256 657 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 RBM20Q5T481 1227 aaKnown RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 TSTD2Q5T7W7 516 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 THEMIS2Q5TEJ8 643 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 TAF2Q6P1X5 1199 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 USP45Q70EL2 814 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PPP1R32Q7Z5V6 425 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 AMIGO2Q86SJ2 522 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PPP1R3BQ86XI6 285 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PRR18Q8N4B5 295 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 CPA6Q8N4T0 437 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 POC1BQ8TC44 478 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 TNPO1Q92973 898 aaKnown RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 FKBP10Q96AY3 582 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 HSPBAP1Q96EW2 488 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PGBD1Q96JS3 809 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 PBKQ96KB5 322 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 OSBPL9Q96SU4 736 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ACTRT3Q9BYD9 372 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 BRINP2Q9C0B6 783 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 MRPL46Q9H2W6 279 aaKnown RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ST6GALNAC1Q9NSC7 600 aaPredicted RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 LMBRD1Q9NUN5 540 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ZDHHC8Q9ULC8 765 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 NR2E3Q9Y5X4 410 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 FNDC1Q4ZHG4 1894 aaPredicted RBP1.88□□□□□ -2.11
UBXN4-207ENST00000471246 SPATA31A3Q5VYP0 1347 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ADGRA2Q96PE1 1338 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 CNTNAP2Q9UHC6 1331 aa1.88□□□□□ -2.11
UBXN4-207ENST00000471246 ANKRD62A6NC57 917 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 WIPF3A6NGB9 483 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ERVV-2B6SEH9 535 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 F5H697 171 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 GCOM1H8Y6P7 765 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 TRIAP1O43715 76 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 PROP1O75360 226 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 SOAT2O75908 522 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 GNAI2P04899 355 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 POU2F2P09086 479 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 EBLN1P0CF75 366 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 PF4V1P10720 104 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 PIM1P11309 404 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 WT1P19544 449 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ITGALP20701 1170 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 DRD4P21917 467 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 CD6P30203 668 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 GCLCP48506 637 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 TOB1P50616 345 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 EXOSC9Q06265 439 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 TCF15Q12870 199 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 EIF2B5Q13144 721 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 BOP1Q14137 746 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 HABP2Q14520 560 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 PGS1Q32NB8 556 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 VPS53Q5VIR6 699 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ZNF788Q6ZQV5 615 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 FAM109AQ8N4B1 249 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 SH2D3CQ8N5H7 860 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 CAMKK1Q8N5S9 505 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 CELF5Q8N6W0 485 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 FAM46DQ8NEK8 389 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 KLHDC4Q8TBB5 520 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 BRIX1Q8TDN6 353 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 SMG7Q92540 1137 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 RFKQ969G6 155 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 HOOK2Q96ED9 719 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 MVB12AQ96EY5 273 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 FAM167AQ96KS9 214 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 NUP88Q99567 741 aaPredicted RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 TIMP4Q99727 224 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ALG8Q9BVK2 526 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ADGRE3Q9BY15 652 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 TPSD1Q9BZJ3 242 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 SIK2Q9H0K1 926 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 KMT5AQ9NQR1 393 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 AASDHPPTQ9NRN7 309 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 KLC4Q9NSK0 619 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 HESX1Q9UBX0 185 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ADAM21Q9UKJ8 722 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 ST3GAL5Q9UNP4 418 aa1.87□□□□□ -2.11
UBXN4-207ENST00000471246 NOP58Q9Y2X3 529 aaKnown RBP1.87□□□□□ -2.11
UBXN4-207ENST00000471246 MANSC4A6NHS7 340 aaPredicted RBP1.86□□□□□ -2.11
UBXN4-207ENST00000471246 KCNAB3O43448 404 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 DNAJB5O75953 348 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 ABLIM3O94929 683 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 NXPH3O95157 252 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 UNC5CO95185 931 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 TTLL1O95922 423 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 PDHA1P08559 390 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 NR2F6P10588 404 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 ZFXP17010 805 aaPredicted RBP1.86□□□□□ -2.11
UBXN4-207ENST00000471246 IBSPP21815 317 aaPredicted RBP1.86□□□□□ -2.11
UBXN4-207ENST00000471246 AKAP5P24588 427 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 ITPKBP27987 946 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 CCT8P50990 548 aa1.86□□□□□ -2.11
UBXN4-207ENST00000471246 CLCN2P51788 898 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms