RNA–Protein interactions for RNA: ENST00000470942.1

HDAC6-218, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-218ENST00000470942 ZNF318Q5VUA4 2279 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 MICAL2O94851 1124 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 CLSTN1O94985 981 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 SRFP11831 508 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 GJA1P17302 382 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 BIRC3Q13489 604 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 SNW1Q13573 536 aaKnown RBP16.84■□□□□ 0.29
HDAC6-218ENST00000470942 VEPH1Q14D04 833 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 SOWAHAQ2M3V2 549 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 DPH6Q7L8W6 267 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 DNAJB7Q7Z6W7 309 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-218ENST00000470942 ITIH5Q86UX2 942 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 ENGASEQ8NFI3 743 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 SPATA18Q8TC71 538 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 PLEKHO2Q8TD55 490 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 GZF1Q9H116 711 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-218ENST00000470942 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 TMLHEQ9NVH6 421 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-218ENST00000470942 TRAF3IP3Q9Y228 551 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 FRMD4BQ9Y2L6 1034 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 KMT2EQ8IZD2 1858 aa16.84■□□□□ 0.29
HDAC6-218ENST00000470942 LRRIQ3A6PVS8 624 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 HAPLN1P10915 354 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 PCSK1P29120 753 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 EPHA5P54756 1037 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 TNNC1P63316 161 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 TAF12Q16514 161 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 NFE2Q16621 373 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 INTS6LQ5JSJ4 861 aaKnown RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 POTEHQ6S545 545 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 SIX5Q8N196 739 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 GUF1Q8N442 669 aaKnown RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 FLCNQ8NFG4 579 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 GPR152Q8TDT2 470 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 GIPC2Q8TF65 315 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 PSMG2Q969U7 264 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 LPIN3Q9BQK8 851 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 PI4K2AQ9BTU6 479 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 SLITRK6Q9H5Y7 841 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 RMND1Q9NWS8 449 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 WNT16Q9UBV4 365 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 HOOK1Q9UJC3 728 aaKnown RBP16.83■□□□□ 0.28
HDAC6-218ENST00000470942 GTF3C4Q9UKN8 822 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 CA14Q9ULX7 337 aa16.83■□□□□ 0.28
HDAC6-218ENST00000470942 A0A1W2PRU2 124 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 STK25O00506 426 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 NRG2O14511 850 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-218ENST00000470942 GABRDO14764 452 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 HCRTO43612 131 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 MOSPD3O75425 235 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 SMC2O95347 1197 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 PDGFRBP09619 1106 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 RFX1P22670 979 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 NR2F2P24468 414 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 AVPR2P30518 371 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 AP3M2P53677 418 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 VCPP55072 806 aaKnown RBP16.82■□□□□ 0.28
HDAC6-218ENST00000470942 MYL6P60660 151 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 TEAD2Q15562 447 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 WDR72Q3MJ13 1102 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 SMYD4Q8IYR2 804 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-218ENST00000470942 SHKBP1Q8TBC3 707 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 TMEM174Q8WUU8 243 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 KBTBD7Q8WVZ9 684 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 LRRC3Q9BY71 257 aa16.82■□□□□ 0.28
HDAC6-218ENST00000470942 ECI2O75521 394 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ATF6P18850 670 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 WARSP23381 471 aaKnown RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 RPL13P26373 211 aaKnown RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ATICP31939 592 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 GPC5P78333 572 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 DLG4P78352 724 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ADAM9Q13443 819 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 FAM78AQ5JUQ0 283 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 TANGO2Q6ICL3 276 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 LIMS2Q7Z4I7 341 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 TMC8Q8IU68 726 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SPATA2LQ8IUW3 424 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 OR6B3Q8NGW1 331 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 TMC2Q8TDI7 906 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ERCC4Q92889 916 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SMARCE1Q969G3 411 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SYAP1Q96A49 352 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ZSWIM3Q96MP5 696 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 TIGD1Q96MW7 591 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SYT15Q9BQS2 421 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 PLA2G2FQ9BZM2 168 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SNX25Q9H3E2 840 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ATXN3LQ9H3M9 355 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ZFP14Q9HCL3 533 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ZNF334Q9HCZ1 680 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 SLC2A4RGQ9NR83 387 aa16.81■□□□□ 0.28
HDAC6-218ENST00000470942 NXF1Q9UBU9 619 aaKnown RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 ARIH1Q9Y4X5 557 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-218ENST00000470942 MYBPHLA2RUH7 354 aa16.8■□□□□ 0.28
HDAC6-218ENST00000470942 ATP2C2O75185 946 aa16.8■□□□□ 0.28
HDAC6-218ENST00000470942 FGF19O95750 216 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms