RNA–Protein interactions for RNA: ENST00000470824.1

PRPF3-204, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 898 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-204ENST00000470824 GOLGA6L3A6NEY3 463 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 CAPN14A8MX76 684 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 NPHP1O15259 732 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 CYP27B1O15528 508 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 VPS4BO75351 444 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 SKAP2O75563 359 aaPredicted RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 CSTBP04080 98 aaKnown RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 FCER1AP12319 257 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 BTF3P20290 206 aaKnown RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 GRK6P43250 576 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 NHLH2Q02577 135 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 SLC29A2Q14542 456 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 IQCB1Q15051 598 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 TUBB8Q3ZCM7 444 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 UBXN11Q5T124 520 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 ZFYVE27Q5T4F4 411 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 RRAGBQ5VZM2 374 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 NAIF1Q69YI7 327 aaPredicted RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 TLDC1Q6P9B6 456 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 FBXO38Q6PIJ6 1188 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 SYT12Q8IV01 421 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 RHOT2Q8IXI1 618 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 CPXCR1Q8N123 301 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 VGLL2Q8N8G2 317 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 SMCR8Q8TEV9 937 aaPredicted RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 RAPGEF4Q8WZA2 1011 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 TRIM63Q969Q1 353 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 LRRC46Q96FV0 321 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 LTV1Q96GA3 475 aaPredicted RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 FAM89AQ96GI7 184 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 KCNC2Q96PR1 638 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 TRIB1Q96RU8 372 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 PPP1R9BQ96SB3 815 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 MNTQ99583 582 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 HEPHQ9BQS7 1158 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 MAGEB5Q9BZ81 275 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 AGO4Q9HCK5 861 aaKnown RBP4.84□□□□□ -1.63
PRPF3-204ENST00000470824 XPNPEP3Q9NQH7 507 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 MID2Q9UJV3 735 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 ATP11BQ9Y2G3 1177 aa4.84□□□□□ -1.63
PRPF3-204ENST00000470824 DIRC3C9JPN6 131 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 GPR42O15529 346 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 A1BGP04217 495 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ATXN1LP0C7T5 689 aaKnown RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ZSCAN22P10073 491 aaPredicted RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 IDEP14735 1019 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 COMTP21964 271 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ACVR2AP27037 513 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 RABGGTBP53611 331 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 INSCQ1MX18 579 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 PLA1AQ53H76 456 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 FAM102AQ5T9C2 384 aaPredicted RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 METRNLQ641Q3 311 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SPTY2D1Q68D10 685 aaPredicted RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 TAPT1Q6NXT6 567 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 FOXR2Q6PJQ5 311 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 LAYNQ6UX15 382 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ZDHHC24Q6UX98 284 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SPOCD1Q6ZMY3 1216 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 KRT28Q7Z3Y7 464 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 LIMS2Q7Z4I7 341 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 GAS2L3Q86XJ1 694 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SIAH1Q8IUQ4 282 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 MYCT1Q8N699 235 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 OR56A1Q8NGH5 318 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 CYP2W1Q8TAV3 490 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SNX27Q96L92 541 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SLC46A1Q96NT5 459 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 MED15Q96RN5 788 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 DCLRE1CQ96SD1 692 aaKnown RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 GPR87Q9BY21 358 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 TTYH3Q9C0H2 523 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 MYLK2Q9H1R3 596 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 DHX36Q9H2U1 1008 aaKnown RBP4.83□□□□□ -1.64
PRPF3-204ENST00000470824 RNPEPQ9H4A4 650 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ZCCHC4Q9H5U6 513 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 ETAA1Q9NY74 926 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 LUZP4Q9P127 313 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 SHOC2Q9UQ13 582 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 RAD54BQ9Y620 910 aa4.83□□□□□ -1.64
PRPF3-204ENST00000470824 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 CCDC195A0A1B0GUA6 201 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 OTOL1A6NHN0 477 aaPredicted RBP4.82□□□□□ -1.64
PRPF3-204ENST00000470824 RAB27BO00194 218 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 LEFTY2O00292 366 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 PODXLO00592 558 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 CCP110O43303 1012 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 SOAT2O75908 522 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 NDST3O95803 873 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 FGAP02671 866 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 MAN2A2P49641 1150 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 COPAP53621 1224 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 BIRC3Q13489 604 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 ARHGEF7Q14155 803 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 PFKFB4Q16877 469 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 MGAT5BQ3V5L5 792 aa4.82□□□□□ -1.64
PRPF3-204ENST00000470824 ZACNQ401N2 412 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms