RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 M0QYV0 167 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 O00370 1275 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 ITIH3Q06033 890 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MTFR1Q15390 333 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 PLEKHA7Q6IQ23 1121 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MRPL10Q7Z7H8 261 aaKnown RBP19.24■□□□□ 0.67
SMC4-211ENST00000469858 OR6B3Q8NGW1 331 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 DEFB118Q96PH6 123 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 SLC38A7Q9NVC3 462 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 CACNG4Q9UBN1 327 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 NME7Q9Y5B8 376 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 SQORQ9Y6N5 450 aa19.24■□□□□ 0.67
SMC4-211ENST00000469858 MIF4GDA9UHW6 222 aaKnown RBP19.23■□□□□ 0.67
SMC4-211ENST00000469858 DNM1LO00429 736 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 GJB6O95452 261 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 THP07101 528 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 LRPAP1P30533 357 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 SCNN1GP51170 649 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 DCAF12L1Q5VU92 463 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 ACOT1Q86TX2 421 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 UBL4BQ8N7F7 174 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 C12orf29Q8N999 325 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 KRT35Q92764 455 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 TRAIPQ9BWF2 469 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 PARD6BQ9BYG5 372 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 RBM12Q9NTZ6 932 aaKnown RBP19.23■□□□□ 0.67
SMC4-211ENST00000469858 PARVAQ9NVD7 372 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 MIOSQ9NXC5 875 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 GDAP2Q9NXN4 497 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 CYTH4Q9UIA0 394 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 A0A0U1RQF3 1178 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 MYO1FO00160 1098 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 ZNF623O75123 536 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 MARCKSL1P49006 195 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 LILRA4P59901 499 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 CNGA2Q16280 664 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 PTPN20Q4JDL3 420 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 CYP4A22Q5TCH4 519 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 TRAF7Q6Q0C0 670 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 ALG3Q92685 438 aa19.23■□□□□ 0.67
SMC4-211ENST00000469858 TSPYL2Q9H2G4 693 aaPredicted RBP19.23■□□□□ 0.67
SMC4-211ENST00000469858 PAK6Q9NQU5 681 aaPredicted RBP19.23■□□□□ 0.67
SMC4-211ENST00000469858 A8MXQ7 604 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 PGRMC1O00264 195 aaKnown RBP19.22■□□□□ 0.67
SMC4-211ENST00000469858 H2AFXP16104 143 aaPredicted RBP19.22■□□□□ 0.67
SMC4-211ENST00000469858 MBTPS1Q14703 1052 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 MSANTD4Q8NCY6 345 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 APPL2Q8NEU8 664 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 ACTRT1Q8TDG2 376 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 KBTBD7Q8WVZ9 684 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 CD101Q93033 1021 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 WNT8AQ9H1J5 351 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 RSAD1Q9HA92 442 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 TSPAN16Q9UKR8 245 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 KIAA1257Q9ULG3 409 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 L1RE1Q9UN81 338 aa19.22■□□□□ 0.67
SMC4-211ENST00000469858 HCRTO43612 131 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 ZNF211Q13398 564 aaPredicted RBP19.21■□□□□ 0.67
SMC4-211ENST00000469858 DNAJC24Q6P3W2 148 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 UNC93AQ86WB7 457 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 RASGEF1CQ8N431 466 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 PDCL2Q8N4E4 241 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 MMGT1Q8N4V1 131 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 UBA3Q8TBC4 463 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 PNKPQ96T60 521 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.21■□□□□ 0.672e-9■■■■■ 123.9
SMC4-211ENST00000469858 RNF208Q9H0X6 261 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 CARD9Q9H257 536 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 FAM49BQ9NUQ9 324 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 TJP2Q9UDY2 1190 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 HUS1O60921 280 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 FEZF2Q8TBJ5 459 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 PGBD4Q96DM1 585 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 CPXM1Q96SM3 734 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 DPEP3Q9H4B8 488 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 SYNCQ9H7C4 482 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 STRIP2Q9ULQ0 834 aa19.21■□□□□ 0.67
SMC4-211ENST00000469858 PDGFRBP09619 1106 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 FGFR1P11362 822 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 CCL5P13501 91 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 CTNNA1P35221 906 aaKnown RBP19.2■□□□□ 0.66
SMC4-211ENST00000469858 CDK7P50613 346 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 CLCNKBP51801 687 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 RPL7AP62424 266 aaKnown RBP19.2■□□□□ 0.66
SMC4-211ENST00000469858 GOLGA7BQ2TAP0 167 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 PPP1R26Q5T8A7 1209 aaPredicted RBP19.2■□□□□ 0.66
SMC4-211ENST00000469858 LCLAT1Q6UWP7 414 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 ADGRF2Q8IZF7 708 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 RNPC3Q96LT9 517 aaKnown RBP19.2■□□□□ 0.66
SMC4-211ENST00000469858 MCEEQ96PE7 176 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 SNX25Q9H3E2 840 aa19.2■□□□□ 0.66
SMC4-211ENST00000469858 ARGLU1Q9NWB6 273 aaPredicted RBP19.2■□□□□ 0.66
SMC4-211ENST00000469858 TCRBV5S1A1TA0A578 114 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CCDC66A2RUB6 948 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 CASTOR2A6NHX0 329 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 PROSCO94903 275 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 POMCP01189 267 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 SKIP12755 728 aa19.19■□□□□ 0.66
SMC4-211ENST00000469858 IGFBP6P24592 240 aaPredicted RBP19.19■□□□□ 0.66
SMC4-211ENST00000469858 GNL1P36915 607 aaPredicted RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms