RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 CLASP2O75122 1294 aaKnown RBP17.08■□□□□ 0.32
GPC1-207ENST00000466624 CILPO75339 1184 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 CSPG5O95196 566 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TPM3P06753 285 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 RPL17P18621 184 aaKnown RBP17.08■□□□□ 0.32
GPC1-207ENST00000466624 KLRC2P26717 231 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 MFAP3P55082 362 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TSPY1Q01534 308 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 ROR1Q01973 937 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 GPR17Q13304 367 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 SYCP1Q15431 976 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TCEAL5Q5H9L2 206 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 INTS6LQ5JSJ4 861 aaKnown RBP17.08■□□□□ 0.32
GPC1-207ENST00000466624 KLHDC7AQ5VTJ3 777 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TPGS2Q68CL5 300 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 SARM1Q6SZW1 724 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 DCP1BQ8IZD4 617 aaKnown RBP17.08■□□□□ 0.32
GPC1-207ENST00000466624 ARID3AQ99856 593 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 DNAI2Q9GZS0 605 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 TLE6Q9H808 572 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 CISHQ9NSE2 258 aa17.08■□□□□ 0.32
GPC1-207ENST00000466624 ADAM12O43184 909 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 NCK2O43639 380 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 ABLIM3O94929 683 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 CPB1P15086 417 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 FOSL2P15408 326 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 TRIM21P19474 475 aaKnown RBP17.07■□□□□ 0.32
GPC1-207ENST00000466624 LMO2P25791 158 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 NRIP1P48552 1158 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 CLCN4P51793 760 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 NDST1P52848 882 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 MAPRE1Q15691 268 aaKnown RBP17.07■□□□□ 0.32
GPC1-207ENST00000466624 UVSSAQ2YD98 709 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 LILRA6Q6PI73 481 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 CRYBG2Q8N1P7 616 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 ZNF461Q8TAF7 563 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 C2orf15Q8WU43 125 aaKnown RBP17.07■□□□□ 0.32
GPC1-207ENST00000466624 HDAC7Q8WUI4 952 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 TNIP3Q96KP6 325 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 KREMEN1Q96MU8 473 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 PKMYT1Q99640 499 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 SYT15Q9BQS2 421 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 LSM14BQ9BX40 385 aaKnown RBP17.07■□□□□ 0.32
GPC1-207ENST00000466624 UBE2TQ9NPD8 197 aaPredicted RBP17.07■□□□□ 0.32
GPC1-207ENST00000466624 IFNKQ9P0W0 207 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 DPP7Q9UHL4 492 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 NME7Q9Y5B8 376 aa17.07■□□□□ 0.32
GPC1-207ENST00000466624 WDR27A2RRH5 827 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 GLUD1P00367 558 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 UCHL3P15374 230 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 CD58P19256 250 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
GPC1-207ENST00000466624 PBX1P40424 430 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 HYAL1Q12794 435 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 KCNC3Q14003 757 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 COL19A1Q14993 1142 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 NFE2Q16621 373 aaPredicted RBP17.06■□□□□ 0.32
GPC1-207ENST00000466624 FAM171BQ6P995 826 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 RTL10Q7L3V2 364 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 RRAGAQ7L523 313 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 EFHBQ8N7U6 833 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 WHAMMQ8TF30 809 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 SLC22A17Q8WUG5 538 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 KAT5Q92993 513 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 TMEM209Q96SK2 561 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 NT5C1AQ9BXI3 368 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 NAA15Q9BXJ9 866 aaKnown RBP17.06■□□□□ 0.32
GPC1-207ENST00000466624 GANQ9H2C0 597 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 HSFX1Q9UBD0 423 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 AFF4Q9UHB7 1163 aaKnown RBP17.06■□□□□ 0.32
GPC1-207ENST00000466624 DNAJC12Q9UKB3 198 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 CNTN6Q9UQ52 1028 aa17.06■□□□□ 0.32
GPC1-207ENST00000466624 TGM5O43548 720 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 HCRTO43612 131 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 NOL4O94818 638 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 PDGFRBP09619 1106 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 ATF2P15336 505 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 PTPN1P18031 435 aaKnown RBP17.05■□□□□ 0.32
GPC1-207ENST00000466624 ACAT1P24752 427 aaKnown RBP17.05■□□□□ 0.32
GPC1-207ENST00000466624 APBA1Q02410 837 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 GJB7Q6PEY0 223 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 TMEM184AQ6ZMB5 413 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 RBM23Q86U06 439 aaKnown RBP17.05■□□□□ 0.32
GPC1-207ENST00000466624 GLYCTKQ8IVS8 523 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 B3GALNT2Q8NCR0 500 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 NEK11Q8NG66 645 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 SPPL2BQ8TCT7 592 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 SHC3Q92529 594 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 XPO4Q9C0E2 1151 aaKnown RBP17.05■□□□□ 0.32
GPC1-207ENST00000466624 PLEKHA4Q9H4M7 779 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 HMGXB4Q9UGU5 601 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 HCFC2Q9Y5Z7 792 aa17.05■□□□□ 0.32
GPC1-207ENST00000466624 MTMR11A4FU01 709 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 PER2O15055 1255 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 OR4Q2P0C623 313 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 SRGAP2BP0DMP2 458 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 KLK7P49862 253 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 ARPP19P56211 112 aa17.04■□□□□ 0.32
GPC1-207ENST00000466624 SLC39A12Q504Y0 691 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms