RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 HAPLN2Q9GZV7 340 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 DDX19AQ9NUU7 478 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 TBX20Q9UMR3 447 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 UBQLN1Q9UMX0 589 aaKnown RBP15.7■□□□□ 0.1
CXCR4-203ENST00000466288 LHX6Q9UPM6 363 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 EML5Q05BV3 1969 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 ITPR1Q14643 2758 aa15.7■□□□□ 0.1
CXCR4-203ENST00000466288 PATE3B3GLJ2 98 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 PPEF2O14830 753 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 JAK2O60674 1132 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 U2AF2P26368 475 aaKnown RBP eCLIP15.69■□□□□ 0.1
CXCR4-203ENST00000466288 TUFMP49411 452 aaKnown RBP15.69■□□□□ 0.1
CXCR4-203ENST00000466288 FXR2P51116 673 aaKnown RBP eCLIP15.69■□□□□ 0.1
CXCR4-203ENST00000466288 AMPD2Q01433 879 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 ORC2Q13416 577 aaPredicted RBP15.69■□□□□ 0.1
CXCR4-203ENST00000466288 DMC1Q14565 340 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 MGAT5BQ3V5L5 792 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 ARMCX5Q6P1M9 558 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 TMEM150AQ86TG1 271 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 GTF3C6Q969F1 213 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 GCNAQ96QF7 691 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 SEPT5Q99719 369 aaPredicted RBP15.69■□□□□ 0.1
CXCR4-203ENST00000466288 P2RY13Q9BPV8 354 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 RUSC1Q9BVN2 902 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 C17orf75Q9HAS0 396 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 ZMYM5Q9UJ78 669 aa15.69■□□□□ 0.1
CXCR4-203ENST00000466288 SFI1A8K8P3 1242 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 CLDN3O15551 220 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 CLTAP09496 248 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 GBP1P32455 592 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 GJA4P35212 333 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 CDR1P51861 262 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 LILRA4P59901 499 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 TRIM29Q14134 588 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 VEPH1Q14D04 833 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 ME3Q16798 604 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 ZPBP2Q6X784 338 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 MAB21L3Q8N8X9 362 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 DEFB124Q8NES8 71 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 GIPC2Q8TF65 315 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 DRC1Q96MC2 740 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 TDP1Q9NUW8 608 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 INVSQ9Y283 1065 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.68■□□□□ 0.1
CXCR4-203ENST00000466288 CELSR3Q9NYQ7 3312 aa15.68■□□□□ 0.1
CXCR4-203ENST00000466288 KIF26AQ9ULI4 1882 aaPredicted RBP15.68■□□□□ 0.1
CXCR4-203ENST00000466288 E9PMD0 336 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 F11P03951 625 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 NMT1P30419 496 aaKnown RBP15.67■□□□□ 0.1
CXCR4-203ENST00000466288 AVPR1AP37288 418 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 TNFSF9P41273 254 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 DGKEP52429 567 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 IRX4P78413 519 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 STRN3Q13033 797 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 SLC39A12Q504Y0 691 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 RINT1Q6NUQ1 792 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 KIAA1211LQ6NV74 962 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 C4orf32Q8N8J7 132 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 TMEM161BQ8NDZ6 487 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 SENP8Q96LD8 212 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 ZCWPW1Q9H0M4 648 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 LRWD1Q9UFC0 647 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 NEUROG3Q9Y4Z2 214 aa15.67■□□□□ 0.1
CXCR4-203ENST00000466288 CITO14578 2027 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 LACTBL1A8MY62 500 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 HYAL3O43820 417 aaPredicted RBP15.66■□□□□ 0.1
CXCR4-203ENST00000466288 CYP11A1P05108 521 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 MAPTP10636 758 aaKnown RBP15.66■□□□□ 0.1
CXCR4-203ENST00000466288 ODC1P11926 461 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 HMGA1P17096 107 aaKnown RBP15.66■□□□□ 0.1
CXCR4-203ENST00000466288 NLRP12P59046 1061 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 BFSP1Q12934 665 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 PDGFRLQ15198 375 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 ANKRD1Q15327 319 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 C11orf74Q86VG3 221 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 SNX29Q8TEQ0 813 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 SPIRE2Q8WWL2 714 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 ACDQ96AP0 544 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 KIF9Q9HAQ2 790 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 DNM3Q9UQ16 869 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 MSRB2Q9Y3D2 182 aa15.66■□□□□ 0.1
CXCR4-203ENST00000466288 TAF4O00268 1085 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 BCKDHBP21953 392 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 DDX6P26196 483 aaKnown RBP eCLIP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 GUCY1B3Q02153 619 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 PPP2R3AQ06190 1150 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 PDIA5Q14554 519 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 ZNF268Q14587 947 aaPredicted RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 TAF12Q16514 161 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 UAP1L1Q3KQV9 507 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 USP39Q53GS9 565 aaKnown RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 SPATA1Q5VX52 437 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 TXNDC8Q6A555 127 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 CC2D1AQ6P1N0 951 aaPredicted RBP15.65■□□□□ 0.1
CXCR4-203ENST00000466288 CYP2U1Q7Z449 544 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 CD101Q93033 1021 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 TPSD1Q9BZJ3 242 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 ECT2Q9H8V3 914 aa15.65■□□□□ 0.1
CXCR4-203ENST00000466288 XPOTO43592 962 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms