RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 VPS52Q8N1B4 723 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 RBBP8NLQ8NC74 664 aaPredicted RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 FBXO22Q8NEZ5 403 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 OLIG1Q8TAK6 271 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 LNX1Q8TBB1 728 aaPredicted RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 CPLX3Q8WVH0 158 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 SPAG5Q96R06 1193 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 DPEP3Q9H4B8 488 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 ALG13Q9NP73 1137 aaKnown RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 DDX43Q9NXZ2 648 aaKnown RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 AIPL1Q9NZN9 384 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 IMPACTQ9P2X3 320 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 MTRRQ9UBK8 725 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 LUC7L2Q9Y383 392 aaKnown RBP11.89□□□□□ -0.51
VCP-204ENST00000466100 PCDHB4Q9Y5E5 795 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 GREB1Q4ZG55 1949 aa11.89□□□□□ -0.51
VCP-204ENST00000466100 XIRP2A4UGR9 3374 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PAEPP09466 180 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 CTSAP10619 480 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ACAT1P24752 427 aaKnown RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 KRT9P35527 623 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PRKCIP41743 596 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 STAT1P42224 750 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 ERVFC1P60507 584 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 KRT17Q04695 432 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ORC1Q13415 861 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PTPN14Q15678 1187 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PSMD5Q16401 504 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 MEA1Q16626 185 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ZNF280DQ6N043 979 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PRSS55Q6UWB4 352 aaPredicted RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 ANKS3Q6ZW76 656 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 IRF2BP2Q7Z5L9 587 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 PPFIBP1Q86W92 1011 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 METTL23Q86XA0 190 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 CRYBG2Q8N1P7 616 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 OR6B3Q8NGW1 331 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 POF1BQ8WVV4 589 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 RIN2Q8WYP3 895 aaPredicted RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 TMEM209Q96SK2 561 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ZSWIM1Q9BR11 485 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ACBD6Q9BR61 282 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 SYT11Q9BT88 431 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 NT5C1AQ9BXI3 368 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 SNX25Q9H3E2 840 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 SLC28A3Q9HAS3 691 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 RXFP1Q9HBX9 757 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ACP6Q9NPH0 428 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 CRTAC1Q9NQ79 661 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 ABHD10Q9NUJ1 306 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 BACE2Q9Y5Z0 518 aa11.88□□□□□ -0.51
VCP-204ENST00000466100 SPTBN5Q9NRC6 3674 aaKnown RBP11.88□□□□□ -0.51
VCP-204ENST00000466100 PRRC2BQ5JSZ5 2229 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 ZNF638Q14966 1978 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 OR6C75A6NL08 312 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 A8MXQ7 604 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 AKR1B15C9JRZ8 316 aaPredicted RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 SOX1O00570 391 aaPredicted RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 CYP26A1O43174 497 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 ADAM12O43184 909 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 LPXNO60711 386 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 ATP2C2O75185 946 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 GFPT2O94808 682 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 CALCAP01258 141 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 URODP06132 367 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 PDGFRBP09619 1106 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 KRT5P13647 590 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 FECHP22830 423 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 PCSK1P29120 753 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 PSMC1P62191 440 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 GPM6BQ13491 265 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 CTXN3Q4LDR2 81 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 ZNF394Q53GI3 561 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 INTS6LQ5JSJ4 861 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 HGSNATQ68CP4 663 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 SLC8B1Q6J4K2 584 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 FAM171BQ6P995 826 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 WDR59Q6PJI9 974 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 LRRTM3Q86VH5 581 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 SLC47A2Q86VL8 602 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 CEP57Q86XR8 500 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 GPIHBP1Q8IV16 184 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 CNGA4Q8IV77 575 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 B3GALNT2Q8NCR0 500 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 OR8K1Q8NGG5 319 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 EPS8L1Q8TE68 723 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 GDPD5Q8WTR4 605 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 AUTS2Q8WXX7 1259 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 TFAP2BQ92481 460 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 DDX1Q92499 740 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 TMEM176AQ96HP8 235 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 LPIN3Q9BQK8 851 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 SYT15Q9BQS2 421 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 ZCWPW1Q9H0M4 648 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 NUCKS1Q9H1E3 243 aaKnown RBP11.87□□□□□ -0.51
VCP-204ENST00000466100 CERS4Q9HA82 394 aa11.87□□□□□ -0.51
VCP-204ENST00000466100 NOCTQ9UK39 431 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms