RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 MED25Q71SY5 747 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 SYT12Q8IV01 421 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 SH2D3CQ8N5H7 860 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 NUP133Q8WUM0 1156 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 KLK15Q9H2R5 256 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 BRD9Q9H8M2 597 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 CASS4Q9NQ75 786 aa5.38□□□□□ -1.55
LRCH3-211ENST00000466054 DDX21Q9NR30 783 aaKnown RBP eCLIP5.38□□□□□ -1.55
LRCH3-211ENST00000466054 PHGDHO43175 533 aaKnown RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 FRS3O43559 492 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 BMP15O95972 392 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 KRT18P05783 430 aaKnown RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 CKBP12277 381 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 TRIM27P14373 513 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 SLC6A4P31645 630 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 GALEQ14376 348 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 FAM102AQ5T9C2 384 aaPredicted RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 AGAP9Q5VTM2 703 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 KIAA1614Q5VZ46 1190 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 METRNLQ641Q3 311 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 ZNF425Q6IV72 752 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 PPP4R4Q6NUP7 873 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 DARS2Q6PI48 645 aaKnown RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 CCDC149Q6ZUS6 474 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 PPP1R3BQ86XI6 285 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 RHOT2Q8IXI1 618 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 FAM156AQ8NDB6 213 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 ACTRT2Q8TDY3 377 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 WASF1Q92558 559 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 TIFAQ96CG3 184 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 SARGQ9BW04 601 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 C1orf43Q9BWL3 253 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 ALG13Q9NP73 1137 aaKnown RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 TBCCD1Q9NVR7 557 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 PIH1D1Q9NWS0 290 aaKnown RBP5.37□□□□□ -1.55
LRCH3-211ENST00000466054 ATP11BQ9Y2G3 1177 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 PCDHA1Q9Y5I3 950 aa5.37□□□□□ -1.55
LRCH3-211ENST00000466054 CDHR4A6H8M9 788 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 GOLIM4O00461 696 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 C1QL1O75973 258 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 CHEK2O96017 543 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 MYL1P05976 194 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 PHKG2P15735 406 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 SLC6A2P23975 617 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 LLGL1Q15334 1064 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 CNN3Q15417 329 aaKnown RBP5.36□□□□□ -1.55
LRCH3-211ENST00000466054 EZH2Q15910 746 aaKnown RBP5.36□□□□□ -1.55
LRCH3-211ENST00000466054 KHDC1LQ5JSQ8 128 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 UTP14CQ5TAP6 766 aaKnown RBP5.36□□□□□ -1.55
LRCH3-211ENST00000466054 RNF220Q5VTB9 566 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 TBC1D15Q8TC07 691 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 DDX17Q92841 729 aaKnown RBP5.36□□□□□ -1.55
LRCH3-211ENST00000466054 SCAMP4Q969E2 229 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 PHACTR3Q96KR7 559 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 SIK2Q9H0K1 926 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 ARMT1Q9H993 441 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 GPR35Q9HC97 309 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 ASB6Q9NWX5 421 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 CNTNAP2Q9UHC6 1331 aa5.36□□□□□ -1.55
LRCH3-211ENST00000466054 A0A1W2PPL8 197 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 MGST3O14880 152 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 AGFG2O95081 481 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 GJB1P08034 283 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 RARBP10826 455 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 SOX8P57073 446 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 POLD3Q15054 466 aaPredicted RBP5.35□□□□□ -1.55
LRCH3-211ENST00000466054 KIAA0753Q2KHM9 967 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 ZNF788Q6ZQV5 615 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 CCAR1Q8IX12 1150 aaKnown RBP5.35□□□□□ -1.55
LRCH3-211ENST00000466054 LRTOMTQ8WZ04 291 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 TNPO1Q92973 898 aaKnown RBP5.35□□□□□ -1.55
LRCH3-211ENST00000466054 ZBTB9Q96C00 473 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 PNKPQ96T60 521 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 RNPEPQ9H4A4 650 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 ARNT2Q9HBZ2 717 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.35□□□□□ -1.55
LRCH3-211ENST00000466054 MED16Q9Y2X0 877 aa5.35□□□□□ -1.55
LRCH3-211ENST00000466054 CFAP69A5D8W1 941 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 PRSS29PA6NIE9 313 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 MARCH11A6NNE9 402 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 MGEA5O60502 916 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 AHSGP02765 367 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 GNAI2P04899 355 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 CFIP05156 583 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 OCA2Q04671 838 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 SEMA5AQ13591 1074 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 SAFBQ15424 915 aaKnown RBP eCLIP5.34□□□□□ -1.55
LRCH3-211ENST00000466054 SWSAP1Q6NVH7 229 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 PTF1AQ7RTS3 328 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 C11orf96Q7Z7L8 435 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 GPR149Q86SP6 731 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 PDPRQ8NCN5 879 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 PJA1Q8NG27 643 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 IL31RAQ8NI17 732 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 FBXO41Q8TF61 875 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 KBTBD7Q8WVZ9 684 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 SUCLG2Q96I99 432 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 MRGPRX1Q96LB2 322 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 MED15Q96RN5 788 aa5.34□□□□□ -1.55
LRCH3-211ENST00000466054 NEU1Q99519 415 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms