RNA–Protein interactions for RNA: ENST00000465534.5

CD55-207, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 1,480 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-207ENST00000465534 GASTP01350 101 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 PTMAP06454 111 aaKnown RBP3.86□□□□□ -1.79
CD55-207ENST00000465534 ATP2A2P16615 1042 aaKnown RBP3.86□□□□□ -1.79
CD55-207ENST00000465534 PTMSP20962 102 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 MMP14P50281 582 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 MEF2AQ02078 507 aaPredicted RBP3.86□□□□□ -1.79
CD55-207ENST00000465534 IDI1Q13907 227 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 SLC4A8Q2Y0W8 1093 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 NAALADL2Q58DX5 795 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 PRAMEF14Q5SWL7 426 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 KIAA1614Q5VZ46 1190 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 EFHBQ8N7U6 833 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 SNX33Q8WV41 574 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 WASF1Q92558 559 aa3.86□□□□□ -1.79
CD55-207ENST00000465534 FUBP1Q96AE4 644 aaKnown RBP3.86□□□□□ -1.79
CD55-207ENST00000465534 EVLQ9UI08 416 aaPredicted RBP3.86□□□□□ -1.79
CD55-207ENST00000465534 C5orf42Q9H799 3197 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 GCC2Q8IWJ2 1684 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 DPEP1P16444 411 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 CANXP27824 592 aaKnown RBP3.85□□□□□ -1.79
CD55-207ENST00000465534 CLRN1P58418 232 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 CALD1Q05682 793 aaKnown RBP3.85□□□□□ -1.79
CD55-207ENST00000465534 MED25Q71SY5 747 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 FAM43AQ8N2R8 423 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 RSAD2Q8WXG1 361 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 ZBTB9Q96C00 473 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 BOD1Q96IK1 185 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 GALNT9Q9HCQ5 603 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 GPRC5DQ9NZD1 345 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 NUMBLQ9Y6R0 609 aa3.85□□□□□ -1.79
CD55-207ENST00000465534 TCF20Q9UGU0 1960 aaKnown RBP3.84□□□□□ -1.79
CD55-207ENST00000465534 A0A1B0GTW7 788 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 LCHNA4D1U4 455 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 CLGNO14967 610 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 PJA2O43164 708 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 TMEM127O75204 238 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 HMGB2P26583 209 aaKnown RBP3.84□□□□□ -1.8
CD55-207ENST00000465534 FLT3LGP49771 235 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 CXADRP78310 365 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 FAM47AQ5JRC9 791 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 FOXR2Q6PJQ5 311 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 FAM43BQ6ZT52 329 aaPredicted RBP3.84□□□□□ -1.8
CD55-207ENST00000465534 GRASPQ7Z6J2 395 aaPredicted RBP3.84□□□□□ -1.8
CD55-207ENST00000465534 CERS3Q8IU89 383 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 PDPRQ8NCN5 879 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 MKL1Q969V6 931 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 PTCD3Q96EY7 689 aaKnown RBP3.84□□□□□ -1.8
CD55-207ENST00000465534 UROC1Q96N76 676 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 PRDM16Q9HAZ2 1276 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 TMEM74BQ9NUR3 256 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 PRSS50Q9UI38 385 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 LTN1O94822 1766 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 USP34Q70CQ2 3546 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 ITPR3Q14573 2671 aa3.84□□□□□ -1.8
CD55-207ENST00000465534 FBN3Q75N90 2809 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 CENPJQ9HC77 1338 aaPredicted RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 MANSC4A6NHS7 340 aaPredicted RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 CXorf49A8MYA2 514 aaPredicted RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 ORC4O43929 436 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 CELA2AP08217 269 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 SNRPA1P09661 255 aaKnown RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 PTPN7P35236 360 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 KPNA1P52294 538 aaPredicted RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 RAP2BP61225 183 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 SRSF7Q16629 238 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD55-207ENST00000465534 KIF18BQ86Y91 864 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 CHTF18Q8WVB6 975 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 DPF1Q92782 380 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 NACC2Q96BF6 587 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 ARMC5Q96C12 935 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 KRTAP2-2Q9BYT5 123 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 RNPEPQ9H4A4 650 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 THG1LQ9NWX6 298 aaKnown RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 KCTD5Q9NXV2 234 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 TMPRSS11EQ9UL52 423 aa3.83□□□□□ -1.8
CD55-207ENST00000465534 TRPM3Q9HCF6 1732 aaPredicted RBP3.83□□□□□ -1.8
CD55-207ENST00000465534 COL4A5P29400 1685 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 CCDC78A2IDD5 438 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 ADCY6O43306 1168 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 KCNAB3O43448 404 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 TGM5O43548 720 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 GPANK1O95872 356 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 SDSP20132 328 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 FGFR4P22455 802 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 LSP1P33241 339 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 CRHR1P34998 444 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 DMWDQ09019 674 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 GPR158Q5T848 1215 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 SMG6Q86US8 1419 aaKnown RBP3.82□□□□□ -1.8
CD55-207ENST00000465534 THNSL2Q86YJ6 484 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 LYSMD2Q8IV50 215 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 NXPE1Q8N323 547 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 LILRB2Q8N423 598 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 REPS2Q8NFH8 660 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 OR14C36Q8NHC7 312 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 ZNF480Q8WV37 535 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 CASKIN1Q8WXD9 1431 aa3.82□□□□□ -1.8
CD55-207ENST00000465534 ZKSCAN4Q969J2 545 aaPredicted RBP3.82□□□□□ -1.8
CD55-207ENST00000465534 FUBP3Q96I24 572 aaKnown RBP eCLIP3.82□□□□□ -1.8
CD55-207ENST00000465534 PAWRQ96IZ0 340 aaKnown RBP3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms