RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 C8orf48Q96LL4 319 aa6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 CPPED1Q9BRF8 314 aaPredicted RBP6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 SSBP3Q9BWW4 388 aaPredicted RBP6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 OBP2AQ9NY56 170 aa6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 HDAC5Q9UQL6 1122 aa6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 CFAP20Q9Y6A4 193 aaKnown RBP6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 MAST4O15021 2626 aa6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 POLR2AP24928 1970 aaKnown RBP6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 GPR179Q6PRD1 2367 aa6.22□□□□□ -1.41
CACNA1C-223ENST00000465278 PALLDQ8WX93 1383 aa6.21□□□□□ -1.41
CACNA1C-223ENST00000465278 ZNF831Q5JPB2 1677 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 SLX4Q8IY92 1834 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 GPR32O75388 356 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ALOX15P16050 662 aaPredicted RBP6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ITGB8P26012 769 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ALDH1A3P47895 512 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 MAP2K6P52564 334 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 TMF1P82094 1093 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ATP8B2P98198 1209 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 GRM3Q14832 879 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ELAVL1Q15717 326 aaKnown RBP6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 SLC4A10Q6U841 1118 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 GADL1Q6ZQY3 521 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 SGMS1Q86VZ5 419 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 C3orf20Q8ND61 904 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 IFI44Q8TCB0 444 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 NSUN6Q8TEA1 469 aaKnown RBP6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 TIFAQ96CG3 184 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 MRGPRX4Q96LA9 322 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 RBM15Q96T37 977 aaKnown RBP eCLIP6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 CGRRF1Q99675 332 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 BDH2Q9BUT1 245 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 MRI1Q9BV20 369 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 KCNH6Q9H252 994 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ARMT1Q9H993 441 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ZNF541Q9H0D2 1346 aa6.21□□□□□ -1.42
CACNA1C-223ENST00000465278 ANKRD11Q6UB99 2663 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 FASNP49327 2511 aaKnown RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 ANKRD50Q9ULJ7 1429 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 CXorf49A8MYA2 514 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 ZNF623O75123 536 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 RAD17O75943 681 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 ITGB3P05106 788 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 HK1P19367 917 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 RAP2BP61225 183 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 SNAPC2Q13487 334 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 MTM1Q13496 603 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 GJC2Q5T442 439 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 TTLL10Q6ZVT0 673 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 GSPT2Q8IYD1 628 aaKnown RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 Q8TCH9 128 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 RGMAQ96B86 450 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 RUNDC1Q96C34 613 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 LSM14BQ9BX40 385 aaKnown RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 MOCS1Q9NZB8 636 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 HECAQ9UBI9 543 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 STAP2Q9UGK3 403 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 SLC23A1Q9UHI7 598 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 NR2E3Q9Y5X4 410 aa6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 FRMPD2Q68DX3 1309 aaPredicted RBP6.2□□□□□ -1.42
CACNA1C-223ENST00000465278 ROCK1Q13464 1354 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 SSC5DA1L4H1 1573 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 MYH14Q7Z406 1995 aaKnown RBP6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 TCRBV7S2A1N4TA0A589 114 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 TBKBP1A7MCY6 615 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 SGTAO43765 313 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 MFAP3LO75121 409 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 UBXN7O94888 489 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 SMARCA1P28370 1054 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 FLT3LGP49771 235 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 HUNKP57058 714 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 CTXN1P60606 82 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 PLP2Q04941 152 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 SP140Q13342 867 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 ICAM4Q14773 271 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 NFIXQ14938 502 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 CSRP2Q16527 193 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 TMEM31Q5JXX7 168 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 SPTY2D1Q68D10 685 aaPredicted RBP6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 RGMBQ6NW40 437 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 UBE3BQ7Z3V4 1068 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 HEATR3Q7Z4Q2 680 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 FAM83AQ86UY5 434 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 DENND1CQ8IV53 801 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 MB21D1Q8N884 522 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 LOXL4Q96JB6 756 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 CCDC136Q96JN2 1154 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 PHACTR3Q96KR7 559 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 KRTAP4-12Q9BQ66 201 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 CHMP4AQ9BY43 222 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 KMT5AQ9NQR1 393 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 GABBR1Q9UBS5 961 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 ST6GALNAC2Q9UJ37 374 aa6.19□□□□□ -1.42
CACNA1C-223ENST00000465278 REV3LO60673 3130 aa6.18□□□□□ -1.42
CACNA1C-223ENST00000465278 H3BUI4 141 aa6.18□□□□□ -1.42
CACNA1C-223ENST00000465278 KIAA0391O15091 583 aaKnown RBP6.18□□□□□ -1.42
CACNA1C-223ENST00000465278 SBK3P0C264 359 aa6.18□□□□□ -1.42
CACNA1C-223ENST00000465278 ATP5JP18859 108 aa6.18□□□□□ -1.42
CACNA1C-223ENST00000465278 GNAT2P19087 354 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms