RNA–Protein interactions for RNA: ENST00000464572.5

SUPT20H-204, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 1 (best)

Gene SUPT20H, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-204ENST00000464572 EFEMP2O95967 443 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 PAEPP09466 180 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 BMPR1AP36894 532 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 PBX2P40425 430 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 CDK17Q00537 523 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 VARS2Q5ST30 1063 aaKnown RBP13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 TMTC1Q8IUR5 882 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 TDHQ8IZJ6 230 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 C12orf29Q8N999 325 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 CCDC112Q8NEF3 446 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 SPATA18Q8TC71 538 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 LPIN3Q9BQK8 851 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 RTP3Q9BQQ7 232 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 TTPALQ9BTX7 342 aa13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 NHEJ1Q9H9Q4 299 aaPredicted RBP13.6□□□□□ -0.23
SUPT20H-204ENST00000464572 THAP12O43422 761 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 ATP2C2O75185 946 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 OAZ2O95190 189 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 BRD2P25440 801 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CTNNB1P35222 781 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 EIF4A3P38919 411 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 PSMC1P62191 440 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CCZ1BP86790 482 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CCZ1P86791 482 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 MLLT1Q03111 559 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 USP41Q3LFD5 358 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 RTP2Q5QGT7 225 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 SMYD5Q6GMV2 418 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 SPRED2Q7Z698 418 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 THEM5Q8N1Q8 247 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 KLHL23Q8NBE8 558 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 TFAP2BQ92481 460 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 TNIP3Q96KP6 325 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 C17orf80Q9BSJ5 609 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 NOCTQ9UK39 431 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 MTUS1Q9ULD2 1270 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 YBX2Q9Y2T7 364 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 VWA8A3KMH1 1905 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 NRDCO43847 1150 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 PCSK1P29120 753 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 SSTR3P32745 418 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 KRT17Q04695 432 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 KIAA0319Q5VV43 1072 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CHRDL2Q6WN34 429 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 RNF168Q8IYW5 571 aaPredicted RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CRYBG2Q8N1P7 616 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 ZNF606Q8WXB4 792 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 DDX1Q92499 740 aaKnown RBP13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 CCDC42Q96M95 316 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 SYT15Q9BQS2 421 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 ZSWIM1Q9BR11 485 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 PBX4Q9BYU1 374 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 DEF6Q9H4E7 631 aa13.59□□□□□ -0.23
SUPT20H-204ENST00000464572 GBF1Q92538 1859 aa13.58□□□□□ -0.23
SUPT20H-204ENST00000464572 SOD2P04179 222 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 MMEP08473 750 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 CDR1P51861 262 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 KIAA1841Q6NSI8 718 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 DDX53Q86TM3 631 aaKnown RBP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 B3GALNT2Q8NCR0 500 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 OR10T2Q8NGX3 314 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 AGPAT1Q99943 283 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 ACBD6Q9BR61 282 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 FAM49BQ9NUQ9 324 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 ADAMTS1Q9UHI8 967 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 RWDD3Q9Y3V2 267 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 TSC2P49815 1807 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 SSU72P8A0A1W2PR75 194 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 VDRP11473 427 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 PTPN1P18031 435 aaKnown RBP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 CDR2Q01850 454 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 MAPK8IP2Q13387 824 aaPredicted RBP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 MRPL58Q14197 206 aaKnown RBP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 MTF1Q14872 753 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 CCDC142Q17RM4 750 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 SGO2Q562F6 1265 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 VPS52Q8N1B4 723 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 TMEM209Q96SK2 561 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 CHST7Q9NS84 486 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 SEPT11Q9NVA2 429 aaKnown RBP13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 CDH9Q9ULB4 789 aa13.58□□□□□ -0.24
SUPT20H-204ENST00000464572 C2CD2LO14523 706 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 CFHP08603 1231 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 CHRNB2P17787 502 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 PLCB3Q01970 1234 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 CTXN3Q4LDR2 81 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 PRSS55Q6UWB4 352 aaPredicted RBP13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 RAD9BQ6WBX8 426 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 GLYCTKQ8IVS8 523 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 RIN2Q8WYP3 895 aaPredicted RBP13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 TRIM44Q96DX7 344 aaPredicted RBP13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 SYT11Q9BT88 431 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 PDCL3Q9H2J4 239 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 CRTAC1Q9NQ79 661 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 GTF3C4Q9UKN8 822 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 KIAA1257Q9ULG3 409 aa13.57□□□□□ -0.24
SUPT20H-204ENST00000464572 MYBPHLA2RUH7 354 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms