RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 PKN2Q16513 984 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 ISLR2Q6UXK2 745 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ZNF280CQ8ND82 737 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 SEPT1Q8WYJ6 367 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 LPAR1Q92633 364 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 CEP41Q9BYV8 373 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 DNPEPQ9ULA0 475 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 MYH10P35580 1976 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 GTPBP10A4D1E9 387 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 ZCCHC18P0CG32 403 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 CCND1P24385 295 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 STX1BP61266 288 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 RCN1Q15293 331 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 FAM182AQ5T1J6 154 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 TMEM154Q6P9G4 183 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 SYDE1Q6ZW31 735 aaPredicted RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 OR6P1Q8NGX9 317 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 IL31RAQ8NI17 732 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 SGF29Q96ES7 293 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 FAM167AQ96KS9 214 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 WWP1Q9H0M0 922 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 TRIM33Q9UPN9 1127 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ARHGAP23Q9P227 1491 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 TCRBV7S2A1N4TA0A589 114 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 AIM2O14862 343 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 KIAA0391O15091 583 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 CCDC22O60826 627 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 PROSCO94903 275 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 EEF1B2P24534 225 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 ABCD1P33897 745 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 CYP24A1Q07973 514 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 FASTKD1Q53R41 847 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 ARMCX2Q7L311 632 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 MCOLN2Q8IZK6 566 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 PRPF31Q8WWY3 499 aaKnown RBP9.51□□□□□ -0.89
HPS4-208ENST00000464362 DNAJC9Q8WXX5 260 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 TTYH3Q9C0H2 523 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 ELP3Q9H9T3 547 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 EPS15L1Q9UBC2 864 aa9.51□□□□□ -0.89
HPS4-208ENST00000464362 F8VP50 259 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 NVLO15381 856 aaKnown RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 BANF1O75531 89 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ADRB2P07550 413 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 SRGAP2BP0DMP2 458 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ENO3P13929 434 aaPredicted RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 KCNJ2P63252 427 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 KLC1Q07866 573 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 AGGF1Q8N302 714 aaeCLIP9.5□□□□□ -0.89
HPS4-208ENST00000464362 TRIML2Q8N7C3 387 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 APOL2Q9BQE5 337 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 SLCO1B3Q9NPD5 702 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ANKEF1Q9NU02 776 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ARMCX1Q9P291 453 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 FAM198AQ9UFP1 575 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 PGK2P07205 417 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 CCNA1P78396 465 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 TRIP10Q15642 601 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 KIF19Q2TAC6 998 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 COBLL1Q53SF7 1204 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 TAF1BQ53T94 588 aaPredicted RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 DPY19L2Q6NUT2 758 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ST13P4Q8IZP2 240 aaPredicted RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 SLC25A41Q8N5S1 370 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 PAFAH2Q99487 392 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 NINJ2Q9NZG7 142 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 PIK3C2AO00443 1686 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 SPDYE2BA6NHP3 402 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 SPDYE6P0CI01 402 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 PRKCIP41743 596 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ALDH5A1P51649 535 aaPredicted RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 EFNA5P52803 228 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 GEMIN4P57678 1058 aaKnown RBP9.5□□□□□ -0.89
HPS4-208ENST00000464362 AP2B1P63010 937 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 TMED1Q13445 227 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 CYTH1Q15438 398 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 SLC35G1Q2M3R5 365 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ATF7IP2Q5U623 682 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 LRRC6Q86X45 466 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 TRAPPC12Q8WVT3 735 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 CISHQ9NSE2 258 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 PNMA3Q9UL41 463 aa9.5□□□□□ -0.89
HPS4-208ENST00000464362 ATP6V1G2O95670 118 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 LMNAP02545 664 aaKnown RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 MYL2P10916 166 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 BGNP21810 368 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 CHKAP35790 457 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 TCF7P36402 384 aaPredicted RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 BTKQ06187 659 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 HIC1Q14526 733 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 PLCB4Q15147 1175 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 NBPF12Q5TAG4 269 aaPredicted RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 EFCAB12Q6NXP0 572 aa9.49□□□□□ -0.89
HPS4-208ENST00000464362 PRPF39Q86UA1 669 aaKnown RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 PDCD6IPQ8WUM4 868 aaKnown RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 FAM163AQ96GL9 167 aaPredicted RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 UNKQ9C0B0 810 aaKnown RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 MRPL46Q9H2W6 279 aaKnown RBP9.49□□□□□ -0.89
HPS4-208ENST00000464362 KIF9Q9HAQ2 790 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms