RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 PCDHB4Q9Y5E5 795 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 BACE2Q9Y5Z0 518 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 IRAK3Q9Y616 596 aa14.82□□□□□ -0.04
PHACTR4-203ENST00000463428 CHD7Q9P2D1 2997 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 H7C4K7 107 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 LPXNO60711 386 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 PDGFRBP09619 1106 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 CLCN1P35523 988 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 SOX5P35711 763 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 ZBED6P86452 979 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 PTPN14Q15678 1187 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 E4F1Q66K89 784 aaPredicted RBP14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 PDXDC1Q6P996 788 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 TMEM270Q6UE05 265 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 THEM5Q8N1Q8 247 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 RBBP8NLQ8NC74 664 aaPredicted RBP14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 AUTS2Q8WXX7 1259 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 TMEM176AQ96HP8 235 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 TMEM209Q96SK2 561 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 CLSTN3Q9BQT9 956 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 NT5C1AQ9BXI3 368 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 DPEP3Q9H4B8 488 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 ZNF576Q9H609 170 aa14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 LUC7L2Q9Y383 392 aaKnown RBP14.81□□□□□ -0.04
PHACTR4-203ENST00000463428 COL4A4P53420 1690 aaPredicted RBP14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 TMEM265A0A087WTH1 108 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 LRRC53A6NM62 1247 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 RFXAPO00287 272 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 CYP26A1O43174 497 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ADAM12O43184 909 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ATP2C2O75185 946 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 URODP06132 367 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ACAT1P24752 427 aaKnown RBP14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 KRT9P35527 623 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 IRS1P35568 1242 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 STAT1P42224 750 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ORC1Q13415 861 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 PSMD5Q16401 504 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 CTXN3Q4LDR2 81 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ZNF394Q53GI3 561 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 SLC8B1Q6J4K2 584 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ZNF280DQ6N043 979 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 KIAA1841Q6NSI8 718 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 FAM171BQ6P995 826 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 TMC7Q7Z402 723 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 IRF2BP2Q7Z5L9 587 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 LRRTM3Q86VH5 581 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 SPAG5Q96R06 1193 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 TCF25Q9BQ70 676 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 LPIN3Q9BQK8 851 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 OXCT2Q9BYC2 517 aaPredicted RBP14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ZCWPW1Q9H0M4 648 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 TTYH1Q9H313 450 aaPredicted RBP14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 ACP6Q9NPH0 428 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 CRTAC1Q9NQ79 661 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 TLR9Q9NR96 1032 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 MRPL17Q9NRX2 175 aaKnown RBP14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 AIPL1Q9NZN9 384 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 FNIP2Q9P278 1114 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 CDH9Q9ULB4 789 aa14.8□□□□□ -0.04
PHACTR4-203ENST00000463428 PTPRDP23468 1912 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 MYBPHLA2RUH7 354 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 OR6C75A6NL08 312 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 C2CD2LO14523 706 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 MFAP3LO75121 409 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 CXCL14O95715 111 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 CALCAP01258 141 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PAEPP09466 180 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 KRT5P13647 590 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PTPN1P18031 435 aaKnown RBP14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PCSK1P29120 753 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 GOLGA8FQ08AF8 430 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 GOLGA8DPQ0D2H9 430 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 CCDC142Q17RM4 750 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 INTS6LQ5JSJ4 861 aaKnown RBP14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 ACOT1Q86TX2 421 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PPFIBP1Q86W92 1011 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 MRPL43Q8N983 215 aaKnown RBP14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 TC2NQ8N9U0 490 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 GDPD5Q8WTR4 605 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PDLIM2Q96JY6 352 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 SYT15Q9BQS2 421 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 ZSWIM1Q9BR11 485 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 LMAN2LQ9H0V9 348 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 NGRNQ9NPE2 291 aaKnown RBP14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 TMLHEQ9NVH6 421 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 IMPACTQ9P2X3 320 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 SSX2IPQ9Y2D8 614 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 PCDHGC5Q9Y5F6 944 aa14.79□□□□□ -0.04
PHACTR4-203ENST00000463428 C2orf71A6NGG8 1288 aa14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 HIDE1A8MVS5 230 aa14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 GFPT2O94808 682 aa14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 CNPP09543 421 aaKnown RBP14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 OR4Q2P0C623 313 aa14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 RPL17P18621 184 aaKnown RBP14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 HNRNPH3P31942 346 aaKnown RBP14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 USP8P40818 1118 aa14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 ADKP55263 362 aaKnown RBP14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 PSMC1P62191 440 aaKnown RBP14.78□□□□□ -0.04
PHACTR4-203ENST00000463428 SMC1AQ14683 1233 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms