RNA–Protein interactions for RNA: ENST00000463330.5

BCCIP-204, Transcript of BRCA2 and CDKN1A interacting protein, human

TSL 3

Gene BCCIP, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BCCIP-204	ENST00000463330	NCR1	O76036	304 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	FGF18	O76093	207 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	MATN4	O95460	622 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	SNRPA1	P09661	255 aa	Known RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	SPATA31D3	P0C874	917 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	RAP2A	P10114	183 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	HARS	P12081	509 aa	Known RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	ARFIP2	P53365	341 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	SOX8	P57073	446 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	CLRN1	P58418	232 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	NOMO3	P69849	1222 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	HTRA4	P83105	476 aa	Predicted RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	MXRA7	P84157	204 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	PMS2P11	Q13670	270 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	BEAN1	Q3B7T3	259 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	KRTAP15-1	Q3LI76	137 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	PDCD4	Q53EL6	469 aa	Known RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	DGKK	Q5KSL6	1271 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	SPATA31D4	Q6ZUB0	917 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	UBE3B	Q7Z3V4	1068 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	PLXDC1	Q8IUK5	500 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	SUPT20H	Q8NEM7	779 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	BRIX1	Q8TDN6	353 aa	Known RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	MAML1	Q92585	1016 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	PHACTR3	Q96KR7	559 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	NEU1	Q99519	415 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	MRI1	Q9BV20	369 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	C11orf54	Q9H0W9	315 aa	Predicted RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	AKIP1	Q9NQ31	210 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	STARD7	Q9NQZ5	370 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	PIH1D1	Q9NWS0	290 aa	Known RBP	4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	LUZP4	Q9P127	313 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	ANKFY1	Q9P2R3	1169 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	ZNHIT2	Q9UHR6	403 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330	LRCH1	Q9Y2L9	728 aa		4.09	□□□□□ -1.75
BCCIP-204	ENST00000463330		A0A087WV62	115 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	GRID2IP	A4D2P6	1211 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	DRGX	A6NNA5	263 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	MARCH11	A6NNE9	402 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	TMEM233	B4DJY2	109 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	BTN3A1	O00481	513 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	APOL1	O14791	398 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	KIAA0391	O15091	583 aa	Known RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	LPXN	O60711	386 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	IL18RAP	O95256	599 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	NDUFA10	O95299	355 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	HLA-DOA	P06340	250 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	PARP1	P09874	1014 aa	Known RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	IL2RB	P14784	551 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	TYRP1	P17643	537 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	EN2	P19622	333 aa	Predicted RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	PROZ	P22891	400 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	CHKA	P35790	457 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	BMPR1A	P36894	532 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	PIK3CG	P48736	1102 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	MAPK10	P53779	464 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	RPS16	P62249	146 aa	Known RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	COL4A3	Q01955	1670 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	CTBP1	Q13363	440 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	DAG1	Q14118	895 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	KRT72	Q14CN4	511 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	CCDC93	Q567U6	631 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	HECTD2	Q5U5R9	776 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	DPY19L2P1	Q6NXN4	242 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	ARHGEF19	Q8IW93	802 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	CASKIN2	Q8WXE0	1202 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	CAVIN3	Q969G5	261 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	C18orf8	Q96DM3	657 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	HERPUD2	Q9BSE4	406 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	TRIM54	Q9BYV2	358 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	UNK	Q9C0B0	810 aa	Known RBP	4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	RIOX1	Q9H6W3	641 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	SMURF2	Q9HAU4	748 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	AS3MT	Q9HBK9	375 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	ARFGAP3	Q9NP61	516 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	PACSIN3	Q9UKS6	424 aa		4.08	□□□□□ -1.76
BCCIP-204	ENST00000463330	FTH1P19	P0C7X4	201 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	RPL17	P18621	184 aa	Known RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	KCNJ5	P48544	419 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	HSPA7	P48741	367 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	CHN2	P52757	468 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	PSMC1	P62191	440 aa	Known RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	CREM	Q03060	361 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	TNFAIP2	Q03169	654 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	BTK	Q06187	659 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	ELF2	Q15723	593 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	MPEG1	Q2M385	716 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	TMEM95	Q3KNT9	176 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	ARL13B	Q3SXY8	428 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	PABPC1L	Q4VXU2	614 aa	Known RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	AGAP9	Q5VTM2	703 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	OTUD7B	Q6GQQ9	843 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	ZNF529	Q6P280	563 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	MYLK4	Q86YV6	388 aa	Predicted RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	NKAP	Q8N5F7	415 aa	Known RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	ATP11C	Q8NB49	1132 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	CPEB3	Q8NE35	698 aa	Known RBP	4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	IL17RD	Q8NFM7	739 aa		4.07	□□□□□ -1.76
BCCIP-204	ENST00000463330	GPR150	Q8NGU9	434 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms