RNA–Protein interactions for RNA: ENST00000463230.5

R3HDM1-213, Transcript of R3H domain containing 1, humanhuman

TSL 2

Gene R3HDM1, Length 2,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-213ENST00000463230 ZNF512Q96ME7 567 aaPredicted RBP14□□□□□ -0.17
R3HDM1-213ENST00000463230 XYLT2Q9H1B5 865 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 DDX43Q9NXZ2 648 aaKnown RBP14□□□□□ -0.17
R3HDM1-213ENST00000463230 KIAA1468Q9P260 1216 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 CDH9Q9ULB4 789 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 CDH7Q9ULB5 785 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 PCDHB5Q9Y5E4 795 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 CST3P01034 146 aaPredicted RBP14□□□□□ -0.17
R3HDM1-213ENST00000463230 OR4Q2P0C623 313 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 ZNF699Q32M78 642 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 ITIH5Q86UX2 942 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 FUBP3Q96I24 572 aaKnown RBP eCLIP14□□□□□ -0.17
R3HDM1-213ENST00000463230 FAM84AQ96KN4 292 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 CEP295NLQ96MC4 621 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 DNMT3BQ9UBC3 853 aaKnown RBP14□□□□□ -0.17
R3HDM1-213ENST00000463230 SORCS3Q9UPU3 1222 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 DOCK8Q8NF50 2099 aa14□□□□□ -0.17
R3HDM1-213ENST00000463230 GOLGA6L22H0YM25 854 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 GBP2P32456 591 aaPredicted RBP13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 MYL6P60660 151 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 TWF1Q12792 350 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 DUSP4Q13115 394 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 ZNF667Q5HYK9 610 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 C1orf220Q5T0J3 134 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 ANKRD40Q6AI12 368 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 SV2AQ7L0J3 742 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 KBTBD7Q8WVZ9 684 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 EDAQ92838 391 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 TMEM209Q96SK2 561 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 PKMYT1Q99640 499 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 SNX25Q9H3E2 840 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 CLSTN2Q9H4D0 955 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 METTL14Q9HCE5 456 aaKnown RBP13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 TMEM8AQ9HCN3 771 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 GDE1Q9NZC3 331 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 POLIQ9UNA4 740 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 NOTCH4Q99466 2003 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 RHOP08100 348 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 HAPLN1P10915 354 aaPredicted RBP13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 DLG4P78352 724 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 VEPH1Q14D04 833 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 WDR72Q3MJ13 1102 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 CYP4A22Q5TCH4 519 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 FEZF2Q8TBJ5 459 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 ERCC4Q92889 916 aaPredicted RBP13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 MYADMQ96S97 322 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 MMS19Q96T76 1030 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 IMPG2Q9BZV3 1241 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 FAM124BQ9H5Z6 455 aaPredicted RBP13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 MUTYHQ9UIF7 546 aa13.99□□□□□ -0.17
R3HDM1-213ENST00000463230 PPP1R3GB7ZBB8 358 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 GPR37L1O60883 481 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 VNN1O95497 513 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 LAMP2P13473 410 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 MAGEA11P43364 429 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ZXDAP98168 799 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 MTMR3Q13615 1198 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 SCARA3Q6AZY7 606 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 FAM171BQ6P995 826 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 C4orf50Q6ZRC1 276 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 MTSS1LQ765P7 747 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 GET4Q7L5D6 327 aaPredicted RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 FILIP1Q7Z7B0 1213 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 LRRTM3Q86VH5 581 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 OSTM1Q86WC4 334 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ATAD1Q8NBU5 361 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 CCDC150Q8NCX0 1101 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 PGLYRP2Q96PD5 576 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 SYT15Q9BQS2 421 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ASAH2Q9NR71 780 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 MRPS23Q9Y3D9 190 aaKnown RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ANHXE9PGG2 379 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 STK25O00506 426 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 RIOK3O14730 519 aaKnown RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 FGFR1OPO95684 399 aaKnown RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 GNA14O95837 355 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ASS1P00966 412 aaKnown RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 PIK3CAP42336 1068 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 RPL10AP62906 217 aaKnown RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 CFAP221Q4G0U5 840 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 PRSS36Q5K4E3 855 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 KRT39Q6A163 491 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 TTI2Q6NXR4 508 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 PDZD4Q76G19 769 aaPredicted RBP13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 FRMD5Q7Z6J6 570 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 KHSRPQ92945 711 aaKnown RBP eCLIP13.98□□□□□ -0.172e-6■■□□□ 11.7
R3HDM1-213ENST00000463230 PSMG2Q969U7 264 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 DNAI2Q9GZS0 605 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 LMBRD1Q9NUN5 540 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 CEP72Q9P209 647 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 ZMYM5Q9UJ78 669 aa13.98□□□□□ -0.17
R3HDM1-213ENST00000463230 N4BP1O75113 896 aaKnown RBP13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 HLA-DRAP01903 254 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 BMP6P22004 513 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 GNL1P36915 607 aaPredicted RBP13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 NUBP1P53384 320 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 NTHL1P78549 312 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 PAK1Q13153 545 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
R3HDM1-213ENST00000463230 CORO1BQ9BR76 489 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms