RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 PDXKO00764 312 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 PHACTR2O75167 634 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 AOC1P19801 751 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 CDC25CP30307 473 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 VCPP55072 806 aaKnown RBP14.06□□□□□ -0.16
HDAC1-203ENST00000463172 WNT7BP56706 349 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 RPL10AP62906 217 aaKnown RBP14.06□□□□□ -0.16
HDAC1-203ENST00000463172 TNNC1P63316 161 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 PRKCQQ04759 706 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 STK4Q13043 487 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 MAPRE1Q15691 268 aaKnown RBP14.06□□□□□ -0.16
HDAC1-203ENST00000463172 LMBRD2Q68DH5 695 aaPredicted RBP14.06□□□□□ -0.16
HDAC1-203ENST00000463172 KRBA2Q6ZNG9 492 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 C4orf50Q6ZRC1 276 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 TRAPPC11Q7Z392 1133 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 DNAJB7Q7Z6W7 309 aaPredicted RBP14.06□□□□□ -0.16
HDAC1-203ENST00000463172 SLC9A9Q8IVB4 645 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 DEPDC1BQ8WUY9 529 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 SMARCD2Q92925 531 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 TMEM209Q96SK2 561 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 MMS19Q96T76 1030 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 KXD1Q9BQD3 176 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 ABCB6Q9NP58 842 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 L1RE1Q9UN81 338 aa14.06□□□□□ -0.16
HDAC1-203ENST00000463172 DPYSL4O14531 572 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 GALR2O43603 387 aaPredicted RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 RHOBTB3O94955 611 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 ZNF202O95125 648 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 FAM163BP0C2L3 166 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 HAPLN1P10915 354 aaPredicted RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 RPL13P26373 211 aaKnown RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 ATICP31939 592 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 GPC5P78333 572 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 BIRC3Q13489 604 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 INTS6LQ5JSJ4 861 aaKnown RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 PHLDB3Q6NSJ2 640 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 SPATA2LQ8IUW3 424 aaPredicted RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 YAF2Q8IY57 180 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 HS6ST3Q8IZP7 471 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 KIAA0895Q8NCT3 520 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 OR5B17Q8NGF7 314 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 TMEM174Q8WUU8 243 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 SYAP1Q96A49 352 aaPredicted RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 TCEAL4Q96EI5 215 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 GTPBP4Q9BZE4 634 aaKnown RBP14.05□□□□□ -0.16
HDAC1-203ENST00000463172 ATXN3LQ9H3M9 355 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 TBC1D17Q9HA65 648 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 RMND1Q9NWS8 449 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 SIX4Q9UIU6 781 aa14.05□□□□□ -0.16
HDAC1-203ENST00000463172 CACNA1HO95180 2353 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 A0A1W2PRU2 124 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 VNN2O95498 520 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 NR3C1P04150 777 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 CSH1P0DML2 217 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 CSH2P0DML3 217 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 P4HA1P13674 534 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 TRIM21P19474 475 aaKnown RBP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 NHLH1Q02575 133 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 KCNB1Q14721 858 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 TEAD2Q15562 447 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 FAM78AQ5JUQ0 283 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 IER5LQ5T953 404 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 CXorf38Q8TB03 319 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 ZSCAN18Q8TBC5 510 aaPredicted RBP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 DNASE1L2Q92874 299 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 IRF7Q92985 503 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 FUBP3Q96I24 572 aaKnown RBP eCLIP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 ASB16Q96NS5 453 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 TRMT61BQ9BVS5 477 aaKnown RBP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 CRISPLD1Q9H336 500 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 SNX25Q9H3E2 840 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 BRD9Q9H8M2 597 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 UXTQ9UBK9 157 aaPredicted RBP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 CDH9Q9ULB4 789 aa14.04□□□□□ -0.16
HDAC1-203ENST00000463172 MRPS17Q9Y2R5 130 aaKnown RBP14.04□□□□□ -0.16
HDAC1-203ENST00000463172 MIA3Q5JRA6 1907 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 ZNF638Q14966 1978 aaKnown RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 KRBA1A5PL33 1030 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 SMC2O95347 1197 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 STAU1O95793 577 aaKnown RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 PSMC3P17980 439 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 WARSP23381 471 aaKnown RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 GABRR2P28476 465 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 CCR2P41597 374 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 DPYDQ12882 1025 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 SNW1Q13573 536 aaKnown RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 MLF2Q15773 248 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 SOWAHAQ2M3V2 549 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 TANGO2Q6ICL3 276 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 LRRTM3Q86VH5 581 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 TMEM105Q8N8V8 129 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 PRSS33Q8NF86 280 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 ST13P5Q8NFI4 369 aaPredicted RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 SHKBP1Q8TBC3 707 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 CHAMP1Q96JM3 812 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 PI4K2AQ9BTU6 479 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 RPP25Q9BUL9 199 aaKnown RBP14.03□□□□□ -0.16
HDAC1-203ENST00000463172 DNAJC25Q9H1X3 360 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 KCTD10Q9H3F6 313 aa14.03□□□□□ -0.16
HDAC1-203ENST00000463172 TRPV4Q9HBA0 871 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms