RNA–Protein interactions for RNA: ENST00000462207.1

PBRM1-219, Transcript of polybromo 1, humanhuman

TSL 2

Gene PBRM1, Length 1,921 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-219ENST00000462207 CCZ1P86791 482 aaPredicted RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 YWHAHQ04917 246 aaPredicted RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 VARS2Q5ST30 1063 aaKnown RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 ZNF571Q7Z3V5 609 aaPredicted RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 METTL23Q86XA0 190 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 TDHQ8IZJ6 230 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 C12orf29Q8N999 325 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 KLHL23Q8NBE8 558 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 TMEM176AQ96HP8 235 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 BAG1Q99933 345 aaPredicted RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 NT5C1AQ9BXI3 368 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 AAASQ9NRG9 546 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 FAM49BQ9NUQ9 324 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 ZNHIT6Q9NWK9 470 aaKnown RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 NOCTQ9UK39 431 aaKnown RBP14.37□□□□□ -0.11
PBRM1-219ENST00000462207 PCDHB12Q9Y5F1 795 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 PCDHA11Q9Y5I1 949 aa14.37□□□□□ -0.11
PBRM1-219ENST00000462207 PDE4DIPQ5VU43 2346 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 SYN3O14994 580 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 CSPG5O95196 566 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 SERPING1P05155 500 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 CD19P15391 556 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PRKCIP41743 596 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PDE6CP51160 858 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 MLLT1Q03111 559 aaPredicted RBP14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PTK2Q05397 1052 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 MTF1Q14872 753 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PRSS55Q6UWB4 352 aaPredicted RBP14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.36□□□□□ -0.11
PBRM1-219ENST00000462207 UNC93AQ86WB7 457 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 SYT15Q9BQS2 421 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 SYT11Q9BT88 431 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 NKX2-4Q9H2Z4 354 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 DSEQ9UL01 958 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 PLXNA4Q9HCM2 1894 aa14.36□□□□□ -0.11
PBRM1-219ENST00000462207 THAP12O43422 761 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 OR4Q2P0C623 313 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 CHRNB2P17787 502 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 PPM1AP35813 382 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 BMPR1AP36894 532 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 EIF4A3P38919 411 aaKnown RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 ELAVL2Q12926 359 aaKnown RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 PALB2Q86YC2 1186 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 DDX1Q92499 740 aaKnown RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 HEXIM2Q96MH2 286 aaKnown RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 TTPALQ9BTX7 342 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 HERC2P3Q9BVR0 1158 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 PRO3102Q9H379 93 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 CRTAC1Q9NQ79 661 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 ARHGEF37A1IGU5 675 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 C2CD2LO14523 706 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 SOD2P04179 222 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 MMEP08473 750 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 PAEPP09466 180 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 CCDC130P13994 396 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 DNAJB2P25686 324 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 LHX1P48742 406 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 TAP1Q03518 808 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 RAD9BQ6WBX8 426 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 DDX53Q86TM3 631 aaKnown RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 VPS52Q8N1B4 723 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 TTC39CQ8N584 583 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 B3GALNT2Q8NCR0 500 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 LNX1Q8TBB1 728 aaPredicted RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 AUTS2Q8WXX7 1259 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 RIN2Q8WYP3 895 aaPredicted RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 FAM124BQ9H5Z6 455 aaPredicted RBP14.35□□□□□ -0.11
PBRM1-219ENST00000462207 CERS4Q9HA82 394 aa14.35□□□□□ -0.11
PBRM1-219ENST00000462207 RANBP2P49792 3224 aaKnown RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 MYBPHLA2RUH7 354 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 OAZ2O95190 189 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 FAM163BP0C2L3 166 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 RPL17P18621 184 aaKnown RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 FMO1Q01740 532 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 MRPL58Q14197 206 aaKnown RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 CTXN3Q4LDR2 81 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 MDH1BQ5I0G3 518 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 RSPO2Q6UXX9 243 aaPredicted RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 CYP26C1Q6V0L0 522 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 PASD1Q8IV76 773 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 GLYCTKQ8IVS8 523 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 NHEJ1Q9H9Q4 299 aaPredicted RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 ALG13Q9NP73 1137 aaKnown RBP14.34□□□□□ -0.11
PBRM1-219ENST00000462207 CHST7Q9NS84 486 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 SPTLC3Q9NUV7 552 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 TMLHEQ9NVH6 421 aa14.34□□□□□ -0.11
PBRM1-219ENST00000462207 CCDC172P0C7W6 258 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 PTPN1P18031 435 aaKnown RBP14.33□□□□□ -0.11
PBRM1-219ENST00000462207 BPIFB4P59827 614 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 CDK17Q00537 523 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 USP41Q3LFD5 358 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 INTS6LQ5JSJ4 861 aaKnown RBP14.33□□□□□ -0.11
PBRM1-219ENST00000462207 PPP1R26Q5T8A7 1209 aaPredicted RBP14.33□□□□□ -0.11
PBRM1-219ENST00000462207 ZNF280DQ6N043 979 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 LRRTM3Q86VH5 581 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 DNAAF5Q86Y56 855 aa14.33□□□□□ -0.11
PBRM1-219ENST00000462207 FMNL3Q8IVF7 1028 aa14.33□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms