RNA–Protein interactions for RNA: ENST00000461974.1

FN1-215, Transcript of fibronectin 1, human

TSL 2

Gene FN1, Length 571 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-215	ENST00000461974	TSC22D4	Q9Y3Q8	395 aa		4.85	□□□□□ -1.63
FN1-215	ENST00000461974	USP15	Q9Y4E8	981 aa	Predicted RBP	4.85	□□□□□ -1.63
FN1-215	ENST00000461974	PRAMEF33	A0A0G2JMD5	474 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	RNASET2	O00584	256 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	AREL1	O15033	823 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	ZNF185	O15231	689 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	PRAMEF10	O60809	474 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	ERN1	O75460	977 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	RPS6KA4	O75676	772 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	KIF20A	O95235	890 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	GPANK1	O95872	356 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	MT-ND5	P03915	603 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	HLA-DOA	P06340	250 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	ELANE	P08246	267 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	TXN	P10599	105 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	IL1R1	P14778	569 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	ANXA11	P50995	505 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	RNASE9	P60153	205 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	BEAN1	Q3B7T3	259 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	C3orf38	Q5JPI3	329 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	FAM209B	Q5JX69	171 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	TAPT1	Q6NXT6	567 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	FOXR2	Q6PJQ5	311 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	BEND5	Q7L4P6	421 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	CLNK	Q7Z7G1	428 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	SLC15A4	Q8N697	577 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	OR56A3	Q8NH54	315 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	C8orf49	Q96NF6	230 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	CERS4	Q9HA82	394 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	TRMT13	Q9NUP7	481 aa	Known RBP	4.84	□□□□□ -1.63
FN1-215	ENST00000461974	PARPBP	Q9NWS1	579 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	CEP72	Q9P209	647 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	FNIP2	Q9P278	1114 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	ST6GALNAC2	Q9UJ37	374 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	SHOC2	Q9UQ13	582 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	RIPOR2	Q9Y4F9	1068 aa		4.84	□□□□□ -1.63
FN1-215	ENST00000461974	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	C1QTNF3-AMACR	E9PGA6	284 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	APOL1	O14791	398 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	THAP12	O43422	761 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	SUN1	O94901	812 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	SCAF4	O95104	1147 aa	Known RBP	4.83	□□□□□ -1.64
FN1-215	ENST00000461974	FGFR2	P21802	821 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	PPIF	P30405	207 aa	Known RBP	4.83	□□□□□ -1.64
FN1-215	ENST00000461974	LRPAP1	P30533	357 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	SATB1	Q01826	763 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	IQCB1	Q15051	598 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	CDSN	Q15517	529 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	DCAF12L1	Q5VU92	463 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-215	ENST00000461974	SP5	Q6BEB4	398 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-215	ENST00000461974	ZNF585A	Q6P3V2	769 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	KRT73	Q86Y46	540 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	TMEM132C	Q8N3T6	1108 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	FAM109A	Q8N4B1	249 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	PSD4	Q8NDX1	1056 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	IL17D	Q8TAD2	202 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	CYP2W1	Q8TAV3	490 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	ZNF483	Q8TF39	744 aa	Predicted RBP	4.83	□□□□□ -1.64
FN1-215	ENST00000461974	MYEOV	Q96EZ4	313 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	PHACTR3	Q96KR7	559 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	PPP1R9B	Q96SB3	815 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	OSBPL9	Q96SU4	736 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	CHST8	Q9H2A9	424 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	GPRC5B	Q9NZH0	403 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	TRPM5	Q9NZQ8	1165 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	SORCS3	Q9UPU3	1222 aa		4.83	□□□□□ -1.64
FN1-215	ENST00000461974	KAT6A	Q92794	2004 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	DCLK1	O15075	740 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	KCNQ3	O43525	872 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	FOXD2	O60548	495 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	MYL4	P12829	197 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	CARS	P49589	748 aa	Known RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	RPS7	P62081	194 aa	Known RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	CXADR	P78310	365 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	ADAM17	P78536	824 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	HSD11B2	P80365	405 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	DYRK1A	Q13627	763 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	CYP2A13	Q16696	494 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	INSC	Q1MX18	579 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	SPATS1	Q496A3	300 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	SFRP4	Q6FHJ7	346 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	TAF2	Q6P1X5	1199 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	USP17L6P	Q6QN14	398 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	MICALCL	Q6ZW33	695 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	KRT28	Q7Z3Y7	464 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	YAF2	Q8IY57	180 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	VGLL2	Q8N8G2	317 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	PCSK9	Q8NBP7	692 aa	Known RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	LRIG1	Q96JA1	1093 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	NELL2	Q99435	816 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	KRTAP9-2	Q9BYQ4	174 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	WDR12	Q9GZL7	423 aa	Known RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	FAM83D	Q9H4H8	585 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	MYH16	Q9H6N6	1097 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	VSX1	Q9NZR4	365 aa	Predicted RBP	4.82	□□□□□ -1.64
FN1-215	ENST00000461974	RAD54B	Q9Y620	910 aa		4.82	□□□□□ -1.64
FN1-215	ENST00000461974	LOC102723971	A0A1B0GUV8	181 aa		4.81	□□□□□ -1.64
FN1-215	ENST00000461974	CCDC78	A2IDD5	438 aa		4.81	□□□□□ -1.64

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