RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 ZSCAN18Q8TBC5 510 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 SPPL2BQ8TCT7 592 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 IRF7Q92985 503 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 NKD2Q969F2 451 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF560Q96MR9 790 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 MKNK1Q9BUB5 465 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 KIAA1586Q9HCI6 787 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF334Q9HCZ1 680 aaPredicted RBP9.87□□□□□ -0.83
BRCA1-207ENST00000461798 LTB4R2Q9NPC1 389 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 ITGA11Q9UKX5 1188 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 CFAP45Q9UL16 551 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 AGAP1Q9UPQ3 857 aa9.87□□□□□ -0.83
BRCA1-207ENST00000461798 PVALEFA0A1B0GWK0 134 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 GOLGA8IPA6NC78 632 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF233A6NK53 670 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 GOLGA8JA6NMD2 632 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 SOBPA7XYQ1 873 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 MAN2B1O00754 1011 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 NCAM2O15394 837 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 LRRN2O75325 713 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 ITGB3P05106 788 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 HAPLN1P10915 354 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 GJA1P17302 382 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 POLR2BP30876 1174 aaKnown RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 VIPR2P41587 438 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 RPS9P46781 194 aaKnown RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 FCHO2Q0JRZ9 810 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 NFE2Q16621 373 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF528Q3MIS6 628 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 SLC39A12Q504Y0 691 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 RESP18Q5W5W9 173 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 UNC13DQ70J99 1090 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 DPH6Q7L8W6 267 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 MAML2Q8IZL2 1156 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 TMEM86AQ8N2M4 240 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 PDCL2Q8N4E4 241 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 TTC9BQ8N6N2 239 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 GLIS3Q8NEA6 775 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 HPS3Q969F9 1004 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 DHX58Q96C10 678 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 ACBD6Q9BR61 282 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 BCO2Q9BYV7 579 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 PCIF1Q9H4Z3 704 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 BRD9Q9H8M2 597 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 IL21Q9HBE4 155 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 PDE11AQ9HCR9 933 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 HEBP1Q9NRV9 189 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 INTS13Q9NVM9 706 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 OBP2AQ9NY56 170 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 ZMYM5Q9UJ78 669 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 PCDHA7Q9UN72 937 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 L1RE1Q9UN81 338 aa9.86□□□□□ -0.83
BRCA1-207ENST00000461798 MRPS17Q9Y2R5 130 aaKnown RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 MTF2Q9Y483 593 aaPredicted RBP9.86□□□□□ -0.83
BRCA1-207ENST00000461798 UBE4BO95155 1302 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 F5P12259 2224 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 HEPACAM2A8MVW5 462 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ARNTLO00327 626 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 GABRDO14764 452 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ZNF263O14978 683 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 CHADO15335 359 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 POLR2DO15514 142 aaKnown RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TGFB1I1O43294 461 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 HUS1O60921 280 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SOAT2O75908 522 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 HSP90AA1P07900 732 aaKnown RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 FAM163BP0C2L3 166 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SP9P0CG40 484 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ATF6P18850 670 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 CD72P21854 359 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TARSP26639 723 aaKnown RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 GDI1P31150 447 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ASIC1P78348 528 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 GRM2Q14416 872 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 UBXN2BQ14CS0 331 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 VEPH1Q14D04 833 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 DUOXA2Q1HG44 320 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 BMT2Q1RMZ1 405 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 FAM26FQ5R3K3 315 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SCARA3Q6AZY7 606 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ADGRD1Q6QNK2 874 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TPRG1Q6ZUI0 275 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 CBWD2Q8IUF1 395 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ARID3BQ8IVW6 561 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TOP6BLQ8N6T0 577 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 LEO1Q8WVC0 666 aaPredicted RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SCFD1Q8WVM8 642 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 RSPRY1Q96DX4 576 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 PKMYT1Q99640 499 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ATXN3LQ9H3M9 355 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TASP1Q9H6P5 420 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 ABCB6Q9NP58 842 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 TMLHEQ9NVH6 421 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 FAM13BQ9NYF5 915 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 HSPBP1Q9NZL4 362 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 CGNQ9P2M7 1197 aaKnown RBP9.85□□□□□ -0.83
BRCA1-207ENST00000461798 SIX4Q9UIU6 781 aa9.85□□□□□ -0.83
BRCA1-207ENST00000461798 FBXO4Q9UKT5 387 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms