RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ZNF197O14709 1029 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 IKBKBO14920 756 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CETN3O15182 167 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CLSTN1O94985 981 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 PCSK1P29120 753 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 PSMC2P35998 433 aaKnown RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 PRCPP42785 496 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CASP4P49662 377 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 TNNC1P63316 161 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CLDN10P78369 228 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 TWF1Q12792 350 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 NFE2Q16621 373 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CYP4A22Q5TCH4 519 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CENPPQ6IPU0 288 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 INTS8Q75QN2 995 aaKnown RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 SMYD4Q8IYR2 804 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 ADGRF2Q8IZF7 708 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 OR10T2Q8NGX3 314 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 NXPE3Q969Y0 559 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 ACBD6Q9BR61 282 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 IGSF9Q9P2J2 1179 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 EPS15L1Q9UBC2 864 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 DNMT3BQ9UBC3 853 aaKnown RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 CDH7Q9ULB5 785 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 L1RE1Q9UN81 338 aa16.03■□□□□ 0.16
ATG4B-213ENST00000460211 MRPS23Q9Y3D9 190 aaKnown RBP16.03■□□□□ 0.16
ATG4B-213ENST00000460211 DENND4AQ7Z401 1863 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 MTMR11A4FU01 709 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 LRRIQ3A6PVS8 624 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-213ENST00000460211 PSMA7O14818 248 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 CST3P01034 146 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-213ENST00000460211 RHOP08100 348 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 FAM163BP0C2L3 166 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 VAMP7P51809 220 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 NTHL1P78549 312 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 ENPEPQ07075 957 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 FAM186BQ8IYM0 893 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 ATAD1Q8NBU5 361 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 SPPL2BQ8TCT7 592 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 ERCC4Q92889 916 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-213ENST00000460211 MYADMQ96S97 322 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 TMEM209Q96SK2 561 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 RTP3Q9BQQ7 232 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 CORO1BQ9BR76 489 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 AVENQ9NQS1 362 aaPredicted RBP16.02■□□□□ 0.16
ATG4B-213ENST00000460211 SLC27A5Q9Y2P5 690 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 YIPF1Q9Y548 306 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 ASB3Q9Y575 518 aa16.02■□□□□ 0.16
ATG4B-213ENST00000460211 AKAP3O75969 853 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 STAU1O95793 577 aaKnown RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 EPB41P11171 864 aaKnown RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 LAMP2P13473 410 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 MYL6P60660 151 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 LRRC63Q05C16 580 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 NCOA4Q13772 614 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 VEPH1Q14D04 833 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 SOWAHAQ2M3V2 549 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 WDR72Q3MJ13 1102 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 MGAT5BQ3V5L5 792 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 CWF19L1Q69YN2 538 aaKnown RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 PDZD4Q76G19 769 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 ITIH5Q86UX2 942 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 DHTKD1Q96HY7 919 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 SEPT5Q99719 369 aaPredicted RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 MKNK1Q9BUB5 465 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 SNX25Q9H3E2 840 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 ASAH2Q9NR71 780 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 HCFC1R1Q9NWW0 138 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 MAN1B1Q9UKM7 699 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 PCDHB5Q9Y5E4 795 aa16.01■□□□□ 0.15
ATG4B-213ENST00000460211 RIF1Q5UIP0 2472 aaKnown RBP16.01■□□□□ 0.15
ATG4B-213ENST00000460211 GABRDO14764 452 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 PI15O43692 258 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 C4BPAP04003 597 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 P4HA1P13674 534 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 CLCN5P51795 746 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 FKBP3Q00688 224 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 FOXK2Q01167 660 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 MAPRE1Q15691 268 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 TAF12Q16514 161 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 SGSM1Q2NKQ1 1148 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 ZNF699Q32M78 642 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 ZCWPW2Q504Y3 356 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 TDRD10Q5VZ19 366 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 SCARA3Q6AZY7 606 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 ISM2Q6H9L7 571 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 ADSSL1Q8N142 457 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 FAM200AQ8TCP9 573 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 PLEKHO2Q8TD55 490 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 FGF13Q92913 245 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 IPO9Q96P70 1041 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 GZF1Q9H116 711 aaPredicted RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 KCNK12Q9HB15 430 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 ABI2Q9NYB9 513 aaPredicted RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 NXF1Q9UBU9 619 aaKnown RBP16■□□□□ 0.15
ATG4B-213ENST00000460211 CDH9Q9ULB4 789 aa16■□□□□ 0.15
ATG4B-213ENST00000460211 C2orf16Q68DN1 1984 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms