RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 SNRNP35Q16560 246 aaKnown RBP16.78■□□□□ 0.28
SDF4-204ENST00000459994 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 RNF19BQ6ZMZ0 732 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 CBWD2Q8IUF1 395 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 EFCAB13Q8IY85 973 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 FAM186BQ8IYM0 893 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 RNF214Q8ND24 703 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 FLCNQ8NFG4 579 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 GPR152Q8TDT2 470 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 EEF2KMTQ96G04 330 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 BORCS6Q96GS4 357 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 TMEM209Q96SK2 561 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 CRISPLD1Q9H336 500 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 CDH7Q9ULB5 785 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 CA14Q9ULX7 337 aa16.78■□□□□ 0.28
SDF4-204ENST00000459994 KIF26AQ9ULI4 1882 aaPredicted RBP16.78■□□□□ 0.28
SDF4-204ENST00000459994 PATJQ8NI35 1801 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 MYO15AQ9UKN7 3530 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 ARHGEF37A1IGU5 675 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 H0Y858 1186 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 XYLBO75191 536 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 RHOP08100 348 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 POU2F2P09086 479 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 ATF2P15336 505 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 CEBPBP17676 345 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 CYP3A5P20815 502 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 EEF1GP26641 437 aaKnown RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 CCR2P41597 374 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 MRE11P49959 708 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 ADCY1Q08828 1119 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 PABPC1LQ4VXU2 614 aaKnown RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 ASTLQ6HA08 431 aaPredicted RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 INTS8Q75QN2 995 aaKnown RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 NPAS3Q8IXF0 933 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 HS6ST3Q8IZP7 471 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 TCEAL4Q96EI5 215 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 CYP4F11Q9HBI6 524 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 MAGEC2Q9UBF1 373 aaPredicted RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
SDF4-204ENST00000459994 FBXL21Q9UKT6 434 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 INSL5Q9Y5Q6 135 aa16.77■□□□□ 0.28
SDF4-204ENST00000459994 KCNJ18B7U540 433 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 H7C4K7 107 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 CYP24A1Q07973 514 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 KCNJ12Q14500 433 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 PSMD6Q15008 389 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 SURF1Q15526 300 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 CCDC40Q4G0X9 1142 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 TCP11X2Q5H9J9 407 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 PRSS36Q5K4E3 855 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 C9orf57Q5W0N0 161 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 ZNF280DQ6N043 979 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 TCEAL8Q8IYN2 117 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 TTC9BQ8N6N2 239 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 RDH13Q8NBN7 331 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 TMC2Q8TDI7 906 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 MCRS1Q96EZ8 462 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 CNOT6LQ96LI5 555 aaKnown RBP16.76■□□□□ 0.27
SDF4-204ENST00000459994 PGLYRP2Q96PD5 576 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 KXD1Q9BQD3 176 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 PLA2G2FQ9BZM2 168 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 MFSD1Q9H3U5 465 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 CEP72Q9P209 647 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 USP34Q70CQ2 3546 aa16.76■□□□□ 0.27
SDF4-204ENST00000459994 NUP210Q8TEM1 1887 aaPredicted RBP16.76■□□□□ 0.27
SDF4-204ENST00000459994 ANO9A1A5B4 782 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 LRRC10BA6NIK2 292 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 PIRO00625 290 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 PRRG1O14668 218 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 IL18RAPO95256 599 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 SRFP11831 508 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 KRT13P13646 458 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 CPB1P15086 417 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 CDK11BP21127 795 aaKnown RBP16.75■□□□□ 0.27
SDF4-204ENST00000459994 PTPN5P54829 565 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 LILRA4P59901 499 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 GPC5P78333 572 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 TMEM132DQ14C87 1099 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 USP37Q86T82 979 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 TRIM59Q8IWR1 403 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 CD302Q8IX05 232 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 CORO1BQ9BR76 489 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 RBAKQ9NYW8 714 aaPredicted RBP16.75■□□□□ 0.27
SDF4-204ENST00000459994 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
SDF4-204ENST00000459994 DMDP11532 3685 aa16.75■□□□□ 0.27
SDF4-204ENST00000459994 GALR2O43603 387 aaPredicted RBP16.74■□□□□ 0.27
SDF4-204ENST00000459994 MOSPD3O75425 235 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 OAZ2O95190 189 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 LRG1P02750 347 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 GJA1P17302 382 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 AOC1P19801 751 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 ELF1P32519 619 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 YWHAHQ04917 246 aaPredicted RBP16.74■□□□□ 0.27
SDF4-204ENST00000459994 TWF1Q12792 350 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 BFSP1Q12934 665 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 DSTYKQ6XUX3 929 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 APPL2Q8NEU8 664 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 BEST2Q8NFU1 509 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms