RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 TRPC3Q13507 836 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 TAF12Q16514 161 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 ASTLQ6HA08 431 aaPredicted RBP17.41■□□□□ 0.38
CPSF6-203ENST00000456847 LRRTM3Q86VH5 581 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 SPATA18Q8TC71 538 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 PRRX2Q99811 253 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 LPIN3Q9BQK8 851 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 SLC2A4RGQ9NR83 387 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 PDXKO00764 312 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 PHACTR2O75167 634 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 RHOBTB3O94955 611 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 NR3C1P04150 777 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 LHX1P48742 406 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 TEAD2Q15562 447 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 NFE2Q16621 373 aaPredicted RBP17.41■□□□□ 0.38
CPSF6-203ENST00000456847 INTS6LQ5JSJ4 861 aaKnown RBP17.41■□□□□ 0.38
CPSF6-203ENST00000456847 IER5LQ5T953 404 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 OSTM1Q86WC4 334 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 PSMG2Q969U7 264 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 MMS19Q96T76 1030 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 ACBD6Q9BR61 282 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 KCTD10Q9H3F6 313 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 ARHGEF3Q9NR81 526 aa17.41■□□□□ 0.38
CPSF6-203ENST00000456847 A0A1W2PRU2 124 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 ECI2O75521 394 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 HAPLN1P10915 354 aaPredicted RBP17.4■□□□□ 0.38
CPSF6-203ENST00000456847 PCSK1P29120 753 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 CASP4P49662 377 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 TNNC1P63316 161 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 GPC5P78333 572 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 BIRC3Q13489 604 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 SOWAHAQ2M3V2 549 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 CEP135Q66GS9 1140 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 CWF19L1Q69YN2 538 aaKnown RBP17.4■□□□□ 0.38
CPSF6-203ENST00000456847 DNAJB7Q7Z6W7 309 aaPredicted RBP17.4■□□□□ 0.38
CPSF6-203ENST00000456847 TMC8Q8IU68 726 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 TMEM105Q8N8V8 129 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 SHKBP1Q8TBC3 707 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 GIPC2Q8TF65 315 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 GCNAQ96QF7 691 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 PI4K2AQ9BTU6 479 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 MAPK8IP1Q9UQF2 711 aa17.4■□□□□ 0.38
CPSF6-203ENST00000456847 KRBA1A5PL33 1030 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 MOSPD3O75425 235 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 FGF19O95750 216 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ATF6P18850 670 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 FAM78AQ5JUQ0 283 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 DPH6Q7L8W6 267 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 SLC9A9Q8IVB4 645 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 PRSS33Q8NF86 280 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ELSPBP1Q96BH3 223 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ZNF334Q9HCZ1 680 aaPredicted RBP17.39■□□□□ 0.37
CPSF6-203ENST00000456847 TMLHEQ9NVH6 421 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 FRMD4BQ9Y2L6 1034 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 TRIOO75962 3097 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 NRG2O14511 850 aaPredicted RBP17.39■□□□□ 0.37
CPSF6-203ENST00000456847 GABRR2P28476 465 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 CLCN5P51795 746 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 KCNB1Q14721 858 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 TANGO2Q6ICL3 276 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ZSCAN18Q8TBC5 510 aaPredicted RBP17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ASB16Q96NS5 453 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 LRRC3Q9BY71 257 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ATXN3LQ9H3M9 355 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 TBC1D17Q9HA65 648 aa17.39■□□□□ 0.37
CPSF6-203ENST00000456847 NUP210Q8TEM1 1887 aaPredicted RBP17.39■□□□□ 0.37
CPSF6-203ENST00000456847 ZDBF2Q9HCK1 2354 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 LRRIQ3A6PVS8 624 aaPredicted RBP17.38■□□□□ 0.37
CPSF6-203ENST00000456847 HCRTO43612 131 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 CST3P01034 146 aaPredicted RBP17.38■□□□□ 0.37
CPSF6-203ENST00000456847 PTPN5P54829 565 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 PFKPQ01813 784 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 PNOCQ13519 176 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 ARHGAP15Q53QZ3 475 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 POTEHQ6S545 545 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 SPATA2LQ8IUW3 424 aaPredicted RBP17.38■□□□□ 0.37
CPSF6-203ENST00000456847 FMR1NBQ8N0W7 255 aaPredicted RBP17.38■□□□□ 0.37
CPSF6-203ENST00000456847 ZNF516Q92618 1163 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 ZSWIM3Q96MP5 696 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 SYT15Q9BQS2 421 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 PLA2G2FQ9BZM2 168 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 GPR88Q9GZN0 384 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 DMAC2Q9NW81 257 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 GTF3C4Q9UKN8 822 aa17.38■□□□□ 0.37
CPSF6-203ENST00000456847 NPR3P17342 541 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 AOC1P19801 751 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 FCARP24071 287 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 AP3M2P53677 418 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 PSMC1P62191 440 aaKnown RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 SNW1Q13573 536 aaKnown RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 GRM2Q14416 872 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 PLEKHO2Q8TD55 490 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 PARD3BQ8TEW8 1205 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 KBTBD7Q8WVZ9 684 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 SYAP1Q96A49 352 aaPredicted RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 GZF1Q9H116 711 aaPredicted RBP17.37■□□□□ 0.37
CPSF6-203ENST00000456847 SNX25Q9H3E2 840 aa17.37■□□□□ 0.37
CPSF6-203ENST00000456847 GABRDO14764 452 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms