RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 DDX43Q9NXZ2 648 aaKnown RBP12□□□□□ -0.49
TRAF4-206ENST00000454852 CDH9Q9ULB4 789 aa12□□□□□ -0.49
TRAF4-206ENST00000454852 SSX2IPQ9Y2D8 614 aa12□□□□□ -0.49
TRAF4-206ENST00000454852 PCDHB4Q9Y5E5 795 aa12□□□□□ -0.49
TRAF4-206ENST00000454852 OR6C75A6NL08 312 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 H3BNC9 293 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 H7C4K7 107 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CYP26A1O43174 497 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 LILRB3O75022 631 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 C1RP00736 705 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 SERPING1P05155 500 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CTSAP10619 480 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CYP11B1P15538 503 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CD58P19256 250 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 LMO2P25791 158 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CTNNB1P35222 781 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 DEKP35659 375 aaKnown RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 PBX2P40425 430 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 GLUD2P49448 558 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 ADKP55263 362 aaKnown RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 PTK2Q05397 1052 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 MAPK8IP2Q13387 824 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 STILQ15468 1287 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 ARHGAP17Q68EM7 881 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 SLC8B1Q6J4K2 584 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 ZNF280DQ6N043 979 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 FAM171BQ6P995 826 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 TAS1R1Q7RTX1 841 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 CCDC186Q7Z3E2 898 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 THEM5Q8N1Q8 247 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 SPC24Q8NBT2 197 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 OR6B3Q8NGW1 331 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 LNX1Q8TBB1 728 aaPredicted RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 SPPL3Q8TCT6 385 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 EPS8L1Q8TE68 723 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 DDX1Q92499 740 aaKnown RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 C17orf80Q9BSJ5 609 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 RXFP1Q9HBX9 757 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 MTRRQ9UBK8 725 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 HMGXB4Q9UGU5 601 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 PUF60Q9UHX1 559 aaKnown RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 NOCTQ9UK39 431 aaKnown RBP11.99□□□□□ -0.49
TRAF4-206ENST00000454852 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
TRAF4-206ENST00000454852 TMEM265A0A087WTH1 108 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 SSU72P8A0A1W2PR75 194 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 A8MXQ7 604 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 FSCN2O14926 492 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 GFPT2O94808 682 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 CLSTN1O94985 981 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 PNMA6AP0CW24 399 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 VDRP11473 427 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 KRT5P13647 590 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 CREMQ03060 361 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 SMARCB1Q12824 385 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 MAPRE1Q15691 268 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 ASIC2Q16515 512 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 TSR1Q2NL82 804 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 PRPF38BQ5VTL8 546 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 PDE12Q6L8Q7 609 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 TMEM139Q8IV31 216 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 B3GALNT2Q8NCR0 500 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 OR10T2Q8NGX3 314 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 OLIG1Q8TAK6 271 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 MYCBPAPQ8TBZ2 947 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 ZCWPW1Q9H0M4 648 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 LMAN2LQ9H0V9 348 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 ZNHIT6Q9NWK9 470 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 FNIP2Q9P278 1114 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 PCDHGC3Q9UN70 934 aa11.98□□□□□ -0.49
TRAF4-206ENST00000454852 TIMM13Q9Y5L4 95 aaPredicted RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 RANBP2P49792 3224 aaKnown RBP11.98□□□□□ -0.49
TRAF4-206ENST00000454852 O00370 1275 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 URODP06132 367 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 PTPN1P18031 435 aaKnown RBP11.97□□□□□ -0.49
TRAF4-206ENST00000454852 DNAJB2P25686 324 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 GNA15P30679 374 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 PDE6CP51160 858 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 TSPY1Q01534 308 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 CDR2Q01850 454 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 PTPN14Q15678 1187 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 CNGA2Q16280 664 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 ASTE1Q2TB18 679 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-206ENST00000454852 SLC47A2Q86VL8 602 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 TMTC1Q8IUR5 882 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 LRRC8AQ8IWT6 810 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 VPS52Q8N1B4 723 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 CCDC112Q8NEF3 446 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 ZNF606Q8WXB4 792 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 HNRNPABQ99729 332 aaKnown RBP11.97□□□□□ -0.49
TRAF4-206ENST00000454852 SYT15Q9BQS2 421 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 ZSWIM1Q9BR11 485 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 NKX2-4Q9H2Z4 354 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 SLC28A3Q9HAS3 691 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 NGRNQ9NPE2 291 aaKnown RBP11.97□□□□□ -0.49
TRAF4-206ENST00000454852 CRTAC1Q9NQ79 661 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 ARHGAP20Q9P2F6 1191 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 HSFX1Q9UBD0 423 aa11.97□□□□□ -0.49
TRAF4-206ENST00000454852 MAFFQ9ULX9 164 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms