RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 ATG2AQ2TAZ0 1938 aa11.73□□□□□ -0.53
SCN9A-205ENST00000454569 M0QZQ0 153 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 EFCAB14O75071 495 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 ALDH2P05091 517 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 MMEP08473 750 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 PDGFRBP09619 1106 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 CYP11B1P15538 503 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 FERP16591 822 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 ACAT1P24752 427 aaKnown RBP11.72□□□□□ -0.53
SCN9A-205ENST00000454569 BRD2P25440 801 aaKnown RBP11.72□□□□□ -0.53
SCN9A-205ENST00000454569 MSNP26038 577 aaKnown RBP11.72□□□□□ -0.53
SCN9A-205ENST00000454569 PNPLA4P41247 253 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 KLHL30Q0D2K2 578 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 INCA1Q0VD86 236 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 BTG3Q14201 252 aaPredicted RBP11.72□□□□□ -0.53
SCN9A-205ENST00000454569 TAF3Q5VWG9 929 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 DSTYKQ6XUX3 929 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 TOGARAM2Q6ZUX3 1019 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 ENOSF1Q7L5Y1 443 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 ZSCAN30Q86W11 494 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 HERC6Q8IVU3 1022 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 LRRC43Q8N309 656 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 C12orf29Q8N999 325 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 EPS8L1Q8TE68 723 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 UROC1Q96N76 676 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 TMEM209Q96SK2 561 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 DESI2Q9BSY9 194 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 FAN1Q9Y2M0 1017 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 REXO2Q9Y3B8 237 aaKnown RBP11.72□□□□□ -0.53
SCN9A-205ENST00000454569 SLC4A7Q9Y6M7 1214 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 CDH23Q9H251 3354 aa11.72□□□□□ -0.53
SCN9A-205ENST00000454569 A0A087X0T9 212 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 H0YGN5 161 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 DDX3XO00571 662 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 GABRDO14764 452 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 EFEMP2O95967 443 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 ABL1P00519 1130 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 SERPING1P05155 500 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 FAM228BP0C875 321 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 TKTP29401 623 aaKnown RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 FMO1Q01740 532 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 CYP27A1Q02318 531 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 GFPT1Q06210 699 aaPredicted RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 TDRD12Q587J7 1177 aaKnown RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 CYP26C1Q6V0L0 522 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 ACOT1Q86TX2 421 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 ADGRF2Q8IZF7 708 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 ACRBPQ8NEB7 543 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 APPL2Q8NEU8 664 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 OR6B3Q8NGW1 331 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 SLC30A5Q8TAD4 765 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 JAKMIP2Q96AA8 810 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 SUSD3Q96L08 255 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 YME1L1Q96TA2 773 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 REPIN1Q9BWE0 567 aaKnown RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 MRPL9Q9BYD2 267 aaKnown RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 CYP3A43Q9HB55 503 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 TAS2R14Q9NYV8 317 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 BARX2Q9UMQ3 279 aaPredicted RBP11.71□□□□□ -0.53
SCN9A-205ENST00000454569 ZKSCAN5Q9Y2L8 839 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 DAAM1Q9Y4D1 1078 aa11.71□□□□□ -0.53
SCN9A-205ENST00000454569 TMEM189-UBE2V1I3L0A0 370 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 HUS1O60921 280 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 TACC1O75410 805 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 ATP2A2P16615 1042 aaKnown RBP11.71□□□□□ -0.54
SCN9A-205ENST00000454569 WARSP23381 471 aaKnown RBP11.71□□□□□ -0.54
SCN9A-205ENST00000454569 GNL1P36915 607 aaPredicted RBP11.71□□□□□ -0.54
SCN9A-205ENST00000454569 CDK17Q00537 523 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 KCNT2Q6UVM3 1135 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 GLYCTKQ8IVS8 523 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 CMTR2Q8IYT2 770 aaKnown RBP11.71□□□□□ -0.54
SCN9A-205ENST00000454569 TOP6BLQ8N6T0 577 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 FAXDC2Q96IV6 333 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 AGPAT1Q99943 283 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 GDF15Q99988 308 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 TMEM175Q9BSA9 504 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 NUCKS1Q9H1E3 243 aaKnown RBP11.71□□□□□ -0.54
SCN9A-205ENST00000454569 ADAMTS1Q9UHI8 967 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 ADAM28Q9UKQ2 775 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 NENFQ9UMX5 172 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 STXBP5LQ9Y2K9 1186 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 NR2E3Q9Y5X4 410 aa11.71□□□□□ -0.54
SCN9A-205ENST00000454569 RCCD1A6NED2 376 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 USP27XA6NNY8 438 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 A8MXQ7 604 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 ESPNB1AK53 854 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 TADA2AO75478 443 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 P4HA1P13674 534 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 KIF11P52732 1056 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 PSMC1P62191 440 aaKnown RBP11.7□□□□□ -0.54
SCN9A-205ENST00000454569 RTP2Q5QGT7 225 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 SPOUT1Q5T280 376 aaKnown RBP11.7□□□□□ -0.54
SCN9A-205ENST00000454569 FUT10Q6P4F1 479 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 RSPO2Q6UXX9 243 aaPredicted RBP11.7□□□□□ -0.54
SCN9A-205ENST00000454569 LRRTM3Q86VH5 581 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 TMTC1Q8IUR5 882 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 SLC39A11Q8N1S5 342 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 WDTC1Q8N5D0 677 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 COLGALT1Q8NBJ5 622 aa11.7□□□□□ -0.54
SCN9A-205ENST00000454569 OR10T2Q8NGX3 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms