RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 GUCY2FP51841 1108 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 TNNC1P63316 161 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 DLG4P78352 724 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 YWHAHQ04917 246 aaPredicted RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 CAMK1Q14012 370 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 PTPN14Q15678 1187 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 ANO6Q4KMQ2 910 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 C1orf220Q5T0J3 134 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 TDRD10Q5VZ19 366 aaKnown RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 ZNF280DQ6N043 979 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 CD300LGQ6UXG3 332 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 SPRED2Q7Z698 418 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 THEM5Q8N1Q8 247 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 FBXL13Q8NEE6 735 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 SENP8Q96LD8 212 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 FAM81BQ96LP2 452 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 FAM161BQ96MY7 647 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 GUCD1Q96NT3 240 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 CDK15Q96Q40 435 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 POP1Q99575 1024 aaKnown RBP9.35□□□□□ -0.91
COL28A1-205ENST00000453441 VN1R3Q9BXE9 311 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 GPR62Q9BZJ7 368 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 DNAJC25Q9H1X3 360 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 SIX4Q9UIU6 781 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 MAFFQ9ULX9 164 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 STXBP5LQ9Y2K9 1186 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 COQ4Q9Y3A0 265 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 MTCH2Q9Y6C9 303 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 MYO7AQ13402 2215 aa9.35□□□□□ -0.91
COL28A1-205ENST00000453441 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 C2orf71A6NGG8 1288 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 OR6C75A6NL08 312 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 BECN2A8MW95 431 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 CYB561D2O14569 222 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 TACC1O75410 805 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 ASS1P00966 412 aaKnown RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 HLA-DRAP01903 254 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 TRIM49P0CI25 452 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 TRIM49CP0CI26 452 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 TRIM21P19474 475 aaKnown RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 IGFBP4P22692 258 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 DNAJB1P25685 340 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MTIF2P46199 727 aaKnown RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 BRCC3P46736 316 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 GCLMP48507 274 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 LHX1P48742 406 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 FMO5P49326 533 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 ERVFC1P60507 584 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MYL7Q01449 175 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 PPP3CAQ08209 521 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 SMARCB1Q12824 385 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MRPL58Q14197 206 aaKnown RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 ADGRE1Q14246 886 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 PSMD5Q16401 504 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MAN2A1Q16706 1144 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 ZNF699Q32M78 642 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 ZNF667Q5HYK9 610 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 WDR44Q5JSH3 913 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 RTP2Q5QGT7 225 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 CDKAL1Q5VV42 579 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 PLPP4Q5VZY2 271 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 LMBRD2Q68DH5 695 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 C11orf57Q6ZUT1 292 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 Q7L0L9 218 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 RTL10Q7L3V2 364 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 HASPINQ8TF76 798 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 HDAC7Q8WUI4 952 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MYLIPQ8WY64 445 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 RIN2Q8WYP3 895 aaPredicted RBP9.34□□□□□ -0.91
COL28A1-205ENST00000453441 EEF2KMTQ96G04 330 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MED15Q96RN5 788 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 TLE6Q9H808 572 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 RAB20Q9NX57 234 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 MTRRQ9UBK8 725 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 CACNG4Q9UBN1 327 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 VWA8A3KMH1 1905 aa9.34□□□□□ -0.91
COL28A1-205ENST00000453441 KCNJ18B7U540 433 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 F8W810 466 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 RFXAPO00287 272 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 PPEF2O14830 753 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 TBXAS1P24557 533 aaPredicted RBP9.33□□□□□ -0.92
COL28A1-205ENST00000453441 PCSK1P29120 753 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 TKTP29401 623 aaKnown RBP9.33□□□□□ -0.92
COL28A1-205ENST00000453441 ZNF445P59923 1031 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 MYL6P60660 151 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 YWHAEP62258 255 aaKnown RBP9.33□□□□□ -0.92
COL28A1-205ENST00000453441 KCNJ12Q14500 433 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 DUSP6Q16828 381 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 WDR72Q3MJ13 1102 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 C4orf48Q5BLP8 95 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 TCP11X2Q5H9J9 407 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 TPGS2Q68CL5 300 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 OVOS1Q6IE37 1185 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 SLC8B1Q6J4K2 584 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 LRSAM1Q6UWE0 723 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 LIMS2Q7Z4I7 341 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 CEP57Q86XR8 500 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 IRF2BP1Q8IU81 584 aa9.33□□□□□ -0.92
COL28A1-205ENST00000453441 LNX1Q8TBB1 728 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms