RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CHFRQ96EP1 664 aa12.63□□□□□ -0.39
HERC3-207ENST00000452979 BICD1Q96G01 975 aa12.63□□□□□ -0.39
HERC3-207ENST00000452979 ZC3H10Q96K80 434 aaKnown RBP12.63□□□□□ -0.39
HERC3-207ENST00000452979 LPIN3Q9BQK8 851 aa12.63□□□□□ -0.39
HERC3-207ENST00000452979 GKN1Q9NS71 199 aa12.63□□□□□ -0.39
HERC3-207ENST00000452979 DSEQ9UL01 958 aa12.63□□□□□ -0.39
HERC3-207ENST00000452979 TCHHQ07283 1943 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 TRDMT1O14717 391 aaKnown RBP12.62□□□□□ -0.39
HERC3-207ENST00000452979 HNRNPDLO14979 420 aaKnown RBP12.62□□□□□ -0.39
HERC3-207ENST00000452979 AXIN1O15169 862 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 EPN2O95208 641 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 ANP32AP39687 249 aaKnown RBP12.62□□□□□ -0.39
HERC3-207ENST00000452979 ZNF131P52739 623 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 CYP4F8P98187 520 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 POU5F1Q01860 360 aaKnown RBP12.62□□□□□ -0.39
HERC3-207ENST00000452979 RUNX3Q13761 415 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 VEPH1Q14D04 833 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 SLC39A12Q504Y0 691 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 PLA2G2CQ5R387 149 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 ARL6IP4Q66PJ3 421 aaKnown RBP12.62□□□□□ -0.39
HERC3-207ENST00000452979 IL31Q6EBC2 164 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 FSTL4Q6MZW2 842 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 SLC39A4Q6P5W5 647 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 TMEM150AQ86TG1 271 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 LRRTM3Q86VH5 581 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 CMTM8Q8IZV2 173 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 CAMKK1Q8N5S9 505 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 PLIN2Q99541 437 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 REEP2Q9BRK0 252 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 MSTO1Q9BUK6 570 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 CCSER1Q9C0I3 900 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 ARRDC1-AS1Q9H2J1 176 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 ASB7Q9H672 318 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 HPS4Q9NQG7 708 aa12.62□□□□□ -0.39
HERC3-207ENST00000452979 ZNF638Q14966 1978 aaKnown RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 SPAG17Q6Q759 2223 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 VWA3AA6NCI4 1184 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 OTOL1A6NHN0 477 aaPredicted RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 RPP40O75818 363 aaKnown RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 F11P03951 625 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 NFICP08651 508 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 HAPLN1P10915 354 aaPredicted RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 HMGA1P17096 107 aaKnown RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 DDX6P26196 483 aaKnown RBP eCLIP12.61□□□□□ -0.39
HERC3-207ENST00000452979 PMLP29590 882 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 ABCD1P33897 745 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 SHC2P98077 582 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 GTF2BQ00403 316 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 GRSF1Q12849 480 aaKnown RBP eCLIP12.61□□□□□ -0.39
HERC3-207ENST00000452979 TMEM132DQ14C87 1099 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 MGAT5BQ3V5L5 792 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 N4BP2L1Q5TBK1 243 aaPredicted RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 PKN3Q6P5Z2 889 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 METTL23Q86XA0 190 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 THEM5Q8N1Q8 247 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 MYCT1Q8N699 235 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 SPPL2BQ8TCT7 592 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 CDK5RAP3Q96JB5 506 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 AK8Q96MA6 479 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 GCNAQ96QF7 691 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 FIZ1Q96SL8 496 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 SEPT5Q99719 369 aaPredicted RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 SMG9Q9H0W8 520 aaKnown RBP12.61□□□□□ -0.39
HERC3-207ENST00000452979 PARVGQ9HBI0 331 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 FOXD4L1Q9NU39 408 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 C2CD2Q9Y426 696 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 PCDHGA5Q9Y5G8 931 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 STYXL1Q9Y6J8 313 aa12.61□□□□□ -0.39
HERC3-207ENST00000452979 CYB561D2O14569 222 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 TRAK2O60296 914 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 NLRP12P59046 1061 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 AMPD2Q01433 879 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 ZNF268Q14587 947 aaPredicted RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 AASDHQ4L235 1098 aaPredicted RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 KBTBD6Q86V97 674 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 MON1AQ86VX9 555 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 C12orf50Q8NA57 414 aaPredicted RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 GIPC2Q8TF65 315 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 LRRC15Q8TF66 581 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 USP13Q92995 863 aaPredicted RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 FAM212AQ96EL1 285 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 KIF9Q9HAQ2 790 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 FBRSL1Q9HCM7 1045 aaKnown RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 RXFP3Q9NSD7 469 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 TDP1Q9NUW8 608 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 ANGPTL2Q9UKU9 493 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 SLC8A2Q9UPR5 921 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 CCL26Q9Y258 94 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 KIAA1549LQ6ZVL6 1849 aa12.6□□□□□ -0.39
HERC3-207ENST00000452979 MAP1BP46821 2468 aaKnown RBP12.6□□□□□ -0.39
HERC3-207ENST00000452979 ANKRD63C9JTQ0 380 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 K7ENM7 598 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 DRD1P21728 446 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 AVPR1AP37288 418 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 PXNP49023 591 aaPredicted RBP12.59□□□□□ -0.39
HERC3-207ENST00000452979 ACOT2P49753 483 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 TAF6P49848 677 aa12.59□□□□□ -0.39
HERC3-207ENST00000452979 GALK1P51570 392 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms