RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 CCL16O15467 120 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 N4BP1O75113 896 aaKnown RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 LETM1O95202 739 aaPredicted RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 SEC24AO95486 1093 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 ASS1P00966 412 aaKnown RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 PDGFRBP09619 1106 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 WEE2P0C1S8 567 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 OR4Q2P0C623 313 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 SSTR3P32745 418 aaPredicted RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 MXI1P50539 228 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 EPHB3P54753 998 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 INTS6LQ5JSJ4 861 aaKnown RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 C4orf50Q6ZRC1 276 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 RBM43Q6ZSC3 357 aaKnown RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 OTOP3Q7RTS5 596 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 CREBRFQ8IUR6 639 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 FAM114A1Q8IWE2 563 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 ATAD1Q8NBU5 361 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 OR10T2Q8NGX3 314 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 TAS1R2Q8TE23 839 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 ZNF707Q96C28 371 aaPredicted RBP9.5□□□□□ -0.89
COL8A1-203ENST00000452013 RPGRIP1Q96KN7 1286 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 PGLYRP2Q96PD5 576 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 PPP1R9BQ96SB3 815 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 TMEM209Q96SK2 561 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 RTP3Q9BQQ7 232 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 CYP3A43Q9HB55 503 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 ANO10Q9NW15 660 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 USTQ9Y2C2 406 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 ASB3Q9Y575 518 aa9.5□□□□□ -0.89
COL8A1-203ENST00000452013 COL4A4P53420 1690 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 MTMR11A4FU01 709 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 C19orf67A6NJJ6 358 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 LOC730098B7Z3J9 87 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 ZNF197O14709 1029 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 PMM2O15305 246 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 P4HA2O15460 535 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 PRKCSHP14314 528 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 LMO2P25791 158 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 CDH8P55286 799 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 MARSP56192 900 aaKnown RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 ZP2Q05996 745 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 TWF1Q12792 350 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 TAF12Q16514 161 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 DPCR1Q3MIW9 517 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 MGAT5BQ3V5L5 792 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 CYP4A22Q5TCH4 519 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 FAM171BQ6P995 826 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 GRASPQ7Z6J2 395 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 ITIH5Q86UX2 942 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 LRRTM3Q86VH5 581 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 OSTM1Q86WC4 334 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 SPATA2LQ8IUW3 424 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 TTC39CQ8N584 583 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 LEMD2Q8NC56 503 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 FAM200AQ8TCP9 573 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 KBTBD7Q8WVZ9 684 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 SLC35C1Q96A29 364 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 TNIP3Q96KP6 325 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 SYT15Q9BQS2 421 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 MRPL45Q9BRJ2 306 aaKnown RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 COL25A1Q9BXS0 654 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 POMKQ9H5K3 350 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 MAGEC2Q9UBF1 373 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 GTF3C4Q9UKN8 822 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 COQ4Q9Y3A0 265 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 INSL5Q9Y5Q6 135 aa9.49□□□□□ -0.89
COL8A1-203ENST00000452013 ZFP37Q9Y6Q3 630 aaPredicted RBP9.49□□□□□ -0.89
COL8A1-203ENST00000452013 CHD7Q9P2D1 2997 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 MYBPHLA2RUH7 354 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 DLL1O00548 723 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 AFPP02771 609 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 HAPLN1P10915 354 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 PTPN1P18031 435 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 FSHRP23945 695 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 ACAT1P24752 427 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 GBP2P32456 591 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 FMO5P49326 533 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 RPL10AP62906 217 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 VEPH1Q14D04 833 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 PABPC1LQ4VXU2 614 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 UNC93AQ86WB7 457 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 TRIM59Q8IWR1 403 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 ZDHHC14Q8IZN3 488 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 TDRD5Q8NAT2 981 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 MYCBPAPQ8TBZ2 947 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 ENOX1Q8TC92 643 aaKnown RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 FUBP3Q96I24 572 aaKnown RBP eCLIP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 SEPT5Q99719 369 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 PI4K2AQ9BTU6 479 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 NIF3L1Q9GZT8 377 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 THAP9Q9H5L6 903 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 FAM124BQ9H5Z6 455 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 ABCB6Q9NP58 842 aa9.48□□□□□ -0.89
COL8A1-203ENST00000452013 AVENQ9NQS1 362 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 ABI2Q9NYB9 513 aaPredicted RBP9.48□□□□□ -0.89
COL8A1-203ENST00000452013 DNMT3BQ9UBC3 853 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms