RNA–Protein interactions for RNA: ENST00000451517.5

NDUFA3-209, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 445 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-209ENST00000451517 C3orf58Q8NDZ4 430 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 URGCPQ8TCY9 931 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 ZNF653Q96CK0 615 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 HEXIM2Q96MH2 286 aaKnown RBP11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 PPP1R12CQ9BZL4 782 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 OSGEPQ9NPF4 335 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 UVRAGQ9P2Y5 699 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 CACNG4Q9UBN1 327 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 ATP11BQ9Y2G3 1177 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 INPP5FQ9Y2H2 1132 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 CEP83Q9Y592 693 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 MRFAP1Q9Y605 127 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 SCN1AP35498 2009 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 DNAH12Q6ZR08 3092 aa11.94□□□□□ -0.5
NDUFA3-209ENST00000451517 FAM170AA1A519 330 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 GABRDO14764 452 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 PRLRP16471 622 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 RFC2P35250 354 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 GNL1P36915 607 aaPredicted RBP11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 TERF1P54274 439 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 DSC1Q08554 894 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 MEI1Q5TIA1 1274 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 LIN9Q5TKA1 542 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 ARHGAP17Q68EM7 881 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 CD300LGQ6UXG3 332 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 NECAB2Q7Z6G3 386 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 SYCE1Q8N0S2 351 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 CRIPAKQ8N1N5 446 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 C1orf131Q8NDD1 294 aaKnown RBP11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 MYRIPQ8NFW9 859 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 OR6B3Q8NGW1 331 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 SENP8Q96LD8 212 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 PAAF1Q9BRP4 392 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 TMEM106CQ9BVX2 250 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 NUP85Q9BW27 656 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 SNX25Q9H3E2 840 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 ABCB6Q9NP58 842 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 TMEM39AQ9NV64 488 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 ADAM22Q9P0K1 906 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 CTTNBP2NLQ9P2B4 639 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 KANSL3Q9P2N6 904 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 CNOT8Q9UFF9 292 aaKnown RBP11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 CDC23Q9UJX2 597 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 STXBP5LQ9Y2K9 1186 aa11.93□□□□□ -0.5
NDUFA3-209ENST00000451517 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 A8MXQ7 604 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 ATMINO43313 823 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 B4GALT3O60512 393 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 BUB1BO60566 1050 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 FTCDO95954 541 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 CALB1P05937 261 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 RRM1P23921 792 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 WSCD1Q658N2 575 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 PLEKHA7Q6IQ23 1121 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 C11orf63Q6NUN7 778 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 DCLRE1AQ6PJP8 1040 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 MMS22LQ6ZRQ5 1243 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 ACOT1Q86TX2 421 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 TMEM86AQ8N2M4 240 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 ZNF564Q8TBZ8 553 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 SPATA18Q8TC71 538 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 VWCEQ96DN2 955 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 C11orf70Q9BRQ4 267 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 TLR10Q9BXR5 811 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 DPEP3Q9H4B8 488 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 TBC1D13Q9NVG8 400 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 RNF216Q9NWF9 866 aaPredicted RBP11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 SNX12Q9UMY4 172 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 SAR1BQ9Y6B6 198 aa11.92□□□□□ -0.5
NDUFA3-209ENST00000451517 TCRBV5S1A1TA0A578 114 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 TMEM189-UBE2V1I3L0A0 370 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 M0QYV0 167 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 KIAA0355O15063 1070 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 HOXA2O43364 376 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 HCRTO43612 131 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 NCK2O43639 380 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 DDHD2O94830 711 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 SLU7O95391 586 aaKnown RBP11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 CYP11A1P05108 521 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 SETSIPP0DME0 302 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 ODC1P11926 461 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 LMO2P25791 158 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 GPD2P43304 727 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 WHAMMP3Q1A5X7 153 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 PKDCCQ504Y2 493 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 TIGD5Q53EQ6 642 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 CNKSR3Q6P9H4 555 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 DSTYKQ6XUX3 929 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 DAAM2Q86T65 1068 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 NT5DC3Q86UY8 548 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 ERICH1Q86X53 443 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 ZNF280BQ86YH2 543 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 NPAS4Q8IUM7 802 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 COLGALT2Q8IYK4 626 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 C12orf29Q8N999 325 aa11.91□□□□□ -0.5
NDUFA3-209ENST00000451517 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms