RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 MYL4P12829 197 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 GJA1P17302 382 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 RPL13P26373 211 aaKnown RBP18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 CCR2P41597 374 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 ZNF165P49910 485 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 GPC5P78333 572 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 GPR17Q13304 367 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 C11orf57Q6ZUT1 292 aaPredicted RBP18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 ALYREFQ86V81 257 aaKnown RBP18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 ELMOD1Q8N336 334 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 ATAD1Q8NBU5 361 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 BORCS6Q96GS4 357 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 PHOX2BQ99453 314 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 BPIFA3Q9BQP9 254 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 OXCT2Q9BYC2 517 aaPredicted RBP18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 KCTD10Q9H3F6 313 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 PDE11AQ9HCR9 933 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 WNT16Q9UBV4 365 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 AGAP1Q9UPQ3 857 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 TRAF3IP3Q9Y228 551 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 YIPF1Q9Y548 306 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 WDFY4Q6ZS81 3184 aa18.33■□□□□ 0.52
PRPF40A-204ENST00000450303 BECN2A8MW95 431 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 KIAA0391O15091 583 aaKnown RBP18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 SOAT2O75908 522 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 ITGB3P05106 788 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 POLR2BP30876 1174 aaKnown RBP18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 PTPN5P54829 565 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 STX17P56962 302 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 EDRF1Q3B7T1 1238 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 PRSS36Q5K4E3 855 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 CYP4A22Q5TCH4 519 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 WSCD1Q658N2 575 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 LMBRD2Q68DH5 695 aaPredicted RBP18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 IQCEQ6IPM2 695 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 MTSS1LQ765P7 747 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 PDZD4Q76G19 769 aaPredicted RBP18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 METTL23Q86XA0 190 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 GPD1LQ8N335 351 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 TTC9BQ8N6N2 239 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 OR10T2Q8NGX3 314 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 PRRX2Q99811 253 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 PLA2G2FQ9BZM2 168 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 FAM86C1Q9NVL1 165 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 MAFFQ9ULX9 164 aa18.32■□□□□ 0.52
PRPF40A-204ENST00000450303 MTMR11A4FU01 709 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 KPNA7A9QM74 516 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 H0Y858 1186 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 CYP11A1P05108 521 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 RFX1P22670 979 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 PAX3P23760 479 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 HOXD11P31277 338 aaPredicted RBP18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 CLCN5P51795 746 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 TPM4P67936 248 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 FKBP3Q00688 224 aaKnown RBP18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 MYBPC2Q14324 1141 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 NFIL3Q16649 462 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 SV2CQ496J9 727 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 SLC39A12Q504Y0 691 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 ANKRD40Q6AI12 368 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 NT5DC4Q86YG4 428 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 CBWD2Q8IUF1 395 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 CSGALNACT2Q8N6G5 542 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 C1orf127Q8N9H9 656 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 ENOX1Q8TC92 643 aaKnown RBP18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 CACTINQ8WUQ7 758 aaKnown RBP18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 RTP3Q9BQQ7 232 aa18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 AVENQ9NQS1 362 aaPredicted RBP18.31■□□□□ 0.52
PRPF40A-204ENST00000450303 ZNF197O14709 1029 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 CETN3O15182 167 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 CLIC2O15247 247 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 TGFB1I1O43294 461 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 MOSPD3O75425 235 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 KRT19P08727 400 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 AOC1P19801 751 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 MYL5Q02045 173 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 BFSP1Q12934 665 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 TANGO2Q6ICL3 276 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 C12orf56Q8IXR9 622 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 THEM5Q8N1Q8 247 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 RDH13Q8NBN7 331 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 FAM200AQ8TCP9 573 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 ZSWIM3Q96MP5 696 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 RBSNQ9H1K0 784 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 SLC2A4RGQ9NR83 387 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 AGPAT3Q9NRZ7 376 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 GDE1Q9NZC3 331 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 DSEQ9UL01 958 aa18.3■□□□□ 0.52
PRPF40A-204ENST00000450303 COL4A3Q01955 1670 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 ZNF233A6NK53 670 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 GOLGA6L19H0YKK7 550 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 IKBKBO14920 756 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 GALR2O43603 387 aaPredicted RBP18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 NR3C1P04150 777 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 ALDH1A3P47895 512 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 EPHB3P54753 998 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 ADAM9Q13443 819 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 ZCWPW2Q504Y3 356 aa18.29■□□□□ 0.52
PRPF40A-204ENST00000450303 TTI2Q6NXR4 508 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms