RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SNX9Q9Y5X1 595 aa16.43■□□□□ 0.22
CHD3-205ENST00000449744 CACNA1HO95180 2353 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 KANSL1LA0AUZ9 987 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 NRG2O14511 850 aaPredicted RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 GABRR2P28476 465 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 CYP2J2P51589 502 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 UBXN2BQ14CS0 331 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 ANGPT1Q15389 498 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 SNRNP35Q16560 246 aaKnown RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 NFE2Q16621 373 aaPredicted RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 ARHGAP15Q53QZ3 475 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 LRRTM3Q86VH5 581 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 WDR49Q8IV35 697 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 GRAMD1CQ8IYS0 662 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 XXYLT1Q8NBI6 393 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 PJA1Q8NG27 643 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 OR5B17Q8NGF7 314 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 DEPDC1BQ8WUY9 529 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 LEO1Q8WVC0 666 aaPredicted RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 E2F7Q96AV8 911 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 GCNAQ96QF7 691 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 FNBP1Q96RU3 617 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 LPIN3Q9BQK8 851 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 GDAP2Q9NXN4 497 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 DDX43Q9NXZ2 648 aaKnown RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 CGNQ9P2M7 1197 aaKnown RBP16.42■□□□□ 0.22
CHD3-205ENST00000449744 USP25Q9UHP3 1055 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 SIX4Q9UIU6 781 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
CHD3-205ENST00000449744 A0A1B0GVL5 298 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 DLATP10515 647 aaKnown RBP16.41■□□□□ 0.22
CHD3-205ENST00000449744 HAPLN1P10915 354 aaPredicted RBP16.41■□□□□ 0.22
CHD3-205ENST00000449744 PFKFB1P16118 471 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 PSMC3P17980 439 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 TNNI1P19237 187 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 CMA1P23946 247 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 GDI1P31150 447 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 VIPR2P41587 438 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 LHX1P48742 406 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 KNOP1Q1ED39 458 aaKnown RBP16.41■□□□□ 0.22
CHD3-205ENST00000449744 BMT2Q1RMZ1 405 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 TPRG1Q6ZUI0 275 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 YAF2Q8IY57 180 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 ADGRF2Q8IZF7 708 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 TOP6BLQ8N6T0 577 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 CXorf38Q8TB03 319 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 SPATA18Q8TC71 538 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 GIPC2Q8TF65 315 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 DNASE1L2Q92874 299 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 IRF7Q92985 503 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 CCDC127Q96BQ5 260 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 PAGE5Q96GU1 130 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 HPDLQ96IR7 371 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 ACBD6Q9BR61 282 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 ZNF334Q9HCZ1 680 aaPredicted RBP16.41■□□□□ 0.22
CHD3-205ENST00000449744 EXOC1Q9NV70 894 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 PTPRJQ12913 1337 aa16.41■□□□□ 0.22
CHD3-205ENST00000449744 ZNF263O14978 683 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 ACTN4O43707 911 aaKnown RBP16.4■□□□□ 0.22
CHD3-205ENST00000449744 GFRA3O60609 400 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 PRPF40AO75400 957 aaKnown RBP16.4■□□□□ 0.22
CHD3-205ENST00000449744 ATF6P18850 670 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 ACAT1P24752 427 aaKnown RBP16.4■□□□□ 0.22
CHD3-205ENST00000449744 PCSK1P29120 753 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 CDC25CP30307 473 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 GPR158Q5T848 1215 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 SCARA3Q6AZY7 606 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 VITQ6UXI7 678 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 ZNF852Q6ZMS4 543 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 DPH6Q7L8W6 267 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 GOLGA5Q8TBA6 731 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 NELL2Q99435 816 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 PI4K2AQ9BTU6 479 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 DDX23Q9BUQ8 820 aaKnown RBP16.4■□□□□ 0.22
CHD3-205ENST00000449744 BCO2Q9BYV7 579 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 LTB4R2Q9NPC1 389 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 HEBP1Q9NRV9 189 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 TMLHEQ9NVH6 421 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 MRPS17Q9Y2R5 130 aaKnown RBP16.4■□□□□ 0.22
CHD3-205ENST00000449744 ZDHHC9Q9Y397 364 aa16.4■□□□□ 0.22
CHD3-205ENST00000449744 FAM170BA6NMN3 283 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 HEPACAM2A8MVW5 462 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 DPYSL4O14531 572 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 NCAM2O15394 837 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 EXOC3O60645 756 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 SYKP43405 635 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 CYP24A1Q07973 514 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 PSMD2Q13200 908 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 PSMD6Q15008 389 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 SOWAHAQ2M3V2 549 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 INTS6LQ5JSJ4 861 aaKnown RBP16.39■□□□□ 0.21
CHD3-205ENST00000449744 STXBP5Q5T5C0 1151 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 GAREM2Q75VX8 874 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 TRAPPC11Q7Z392 1133 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 OSTM1Q86WC4 334 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 MFSD6LQ8IWD5 586 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 C12orf56Q8IXR9 622 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 CHAMP1Q96JM3 812 aa16.39■□□□□ 0.21
CHD3-205ENST00000449744 CGRRF1Q99675 332 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms