RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 IQCA1LA6NCM1 817 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 C6orf222P0C671 652 aaPredicted RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 KRT4P19013 534 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 CLCN3P51790 818 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SOX10P56693 466 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 PDK1Q15118 436 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 FAXCQ5TGI0 409 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 EP400NLQ6ZTU2 488 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 CERKQ8TCT0 537 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 TATDN2Q93075 761 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 TRIM49D1C9J1S8 452 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 E5RI56 91 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 MGEA5O60502 916 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SERPINB4P48594 390 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 LAMC2Q13753 1193 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 UGP2Q16851 508 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 TFDP3Q5H9I0 405 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 BTNL9Q6UXG8 535 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 ZFPM1Q8IX07 1006 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 ULK4Q96C45 1275 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 PPP1R36Q96LQ0 422 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 CGRRF1Q99675 332 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 IDI2Q9BXS1 227 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SEMA4AQ9H3S1 761 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.88□□□□□ -0.67
CTC1-202ENST00000449476 POLIQ9UNA4 740 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 AP3B1O00203 1094 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 ZBTB39O15060 712 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 MAP3K6O95382 1288 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 RHBDL3P58872 404 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 USP10Q14694 798 aaKnown RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 EFHC1Q5JVL4 640 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 C11orf63Q6NUN7 778 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 LRRC6Q86X45 466 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 ANKRD13AQ8IZ07 590 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 RMDN1Q96DB5 314 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 GCNAQ96QF7 691 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 FRMD8Q9BZ67 464 aaPredicted RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 MANSC1Q9H8J5 431 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 NEMP1O14524 444 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 PYGBP11216 843 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SPRP35270 261 aaPredicted RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 GNL1P36915 607 aaPredicted RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 GRIK1P39086 918 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 ERVK-9P63128 1117 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 CXCL9Q07325 125 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 MROH9Q5TGP6 573 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 MFSD14CQ5VZR4 134 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SPATA2LQ8IUW3 424 aaPredicted RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 PARD3BQ8TEW8 1205 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 SLC8A2Q9UPR5 921 aa10.88□□□□□ -0.67
CTC1-202ENST00000449476 MTO1Q9Y2Z2 717 aaKnown RBP10.88□□□□□ -0.67
CTC1-202ENST00000449476 ARHGAP23Q9P227 1491 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 IGF2BP3O00425 579 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTC1-202ENST00000449476 NPTXRO95502 500 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 POLBP06746 335 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 RECQLP46063 649 aaPredicted RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 SLC12A3P55017 1021 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 TMEM259Q4ZIN3 620 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 TEDDM1Q5T9Z0 273 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 CNPY4Q8N129 248 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 PPHLN1Q8NEY8 458 aaKnown RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 SLC7A14Q8TBB6 771 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 KRT35Q92764 455 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 E2F7Q96AV8 911 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 GRID1Q9ULK0 1009 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 B2RBV5 119 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 VIL1P09327 827 aaKnown RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 MAPTP10636 758 aaKnown RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 MYL6P60660 151 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 OTUD4Q01804 1114 aaKnown RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 DNAL1Q4LDG9 190 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 TTC39BQ5VTQ0 682 aaPredicted RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 FAM83AQ86UY5 434 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 C3orf20Q8ND61 904 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 ICA1LQ8NDH6 482 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 GPRC5AQ8NFJ5 357 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 EXD1Q8NHP7 514 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 ASAP3Q8TDY4 903 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 SLC5A5Q92911 643 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 NCLNQ969V3 563 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 CISHQ9NSE2 258 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.87□□□□□ -0.67
CTC1-202ENST00000449476 FRMPD4Q14CM0 1322 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 F8W8V4 182 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 FAM153BP0C7A2 387 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 KCNA1Q09470 495 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 IL17AQ16552 155 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 CCNG2Q16589 344 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 CLEC16AQ2KHT3 1053 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 FAM153CQ494X1 144 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 SV2CQ496J9 727 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 NBPF12Q5TAG4 269 aaPredicted RBP10.87□□□□□ -0.67
CTC1-202ENST00000449476 MPZL3Q6UWV2 235 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 SLC16A10Q8TF71 515 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 PTPRN2Q92932 1015 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 THTPAQ9BU02 230 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 ZNF518BQ9C0D4 1074 aa10.87□□□□□ -0.67
CTC1-202ENST00000449476 TSPYL2Q9H2G4 693 aaPredicted RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms