RNA–Protein interactions for RNA: ENST00000449421.6

NUP85-202, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,287 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-202ENST00000449421 ANKRD33Q7Z3H0 272 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 KRT222Q8N1A0 295 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 RNPC3Q96LT9 517 aaKnown RBP13.34□□□□□ -0.27
NUP85-202ENST00000449421 ZNF560Q96MR9 790 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 TOX2Q96NM4 488 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 KRT12Q99456 494 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 C11orf70Q9BRQ4 267 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 GOLPH3Q9H4A6 298 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 CDHR5Q9HBB8 845 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 L1RE1Q9UN81 338 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 POLIQ9UNA4 740 aa13.34□□□□□ -0.27
NUP85-202ENST00000449421 TRIP12Q14669 1992 aaPredicted RBP13.34□□□□□ -0.27
NUP85-202ENST00000449421 MYH10P35580 1976 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 CILPO75339 1184 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 PROSCO94903 275 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 FGGP02679 453 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 PEX5P50542 639 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 RAD23BP54727 409 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 RNASE9P60153 205 aaKnown RBP13.33□□□□□ -0.28
NUP85-202ENST00000449421 INCA1Q0VD86 236 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 ZNF394Q53GI3 561 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 SGO2Q562F6 1265 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 XKR4Q5GH76 650 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 GDF6Q6KF10 455 aaPredicted RBP13.33□□□□□ -0.28
NUP85-202ENST00000449421 SCARA5Q6ZMJ2 495 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 UNC93AQ86WB7 457 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 RHOT1Q8IXI2 618 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 CXorf38Q8TB03 319 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 CD101Q93033 1021 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 NT5C1AQ9BXI3 368 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 VIPAS39Q9H9C1 493 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.33□□□□□ -0.28
NUP85-202ENST00000449421 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
NUP85-202ENST00000449421 ATMINO43313 823 aaPredicted RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 PSTPIP1O43586 416 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 RPS6KA5O75582 802 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 EPHB4P54760 987 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 PAK2Q13177 524 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 NNTQ13423 1086 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 MAMLD1Q13495 774 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 PIGHQ14442 188 aaPredicted RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 ZNF268Q14587 947 aaPredicted RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 FAM47CQ5HY64 1035 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 TWF2Q6IBS0 349 aaKnown RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 DNAJC24Q6P3W2 148 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 EMBQ6PCB8 327 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 DCUN1D2Q6PH85 259 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 MMS22LQ6ZRQ5 1243 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 SERINC5Q86VE9 423 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 PASD1Q8IV76 773 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 FAM126BQ8IXS8 530 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 HEXIM2Q96MH2 286 aaKnown RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 EIF2AQ9BY44 585 aaKnown RBP13.32□□□□□ -0.28
NUP85-202ENST00000449421 FUT8Q9BYC5 575 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 RAB17Q9H0T7 212 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 HOMER3Q9NSC5 361 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 SLC38A7Q9NVC3 462 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 ZNF446Q9NWS9 450 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 EHD2Q9NZN4 543 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 RASAL2Q9UJF2 1139 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 CDY2AQ9Y6F7 541 aa13.32□□□□□ -0.28
NUP85-202ENST00000449421 FAM187AA6NFU0 413 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 MAP2K7O14733 419 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 MEFVO15553 781 aaPredicted RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 SART1O43290 800 aaKnown RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 CAND2O75155 1236 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 RECQL4O94761 1208 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 HEXIM1O94992 359 aaKnown RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 SETSIPP0DME0 302 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 SKIP12755 728 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 DESP17661 470 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 PAX3P23760 479 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 CHRNA3P32297 505 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 GBP1P32455 592 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 CDH8P55286 799 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 GSCP56915 257 aaPredicted RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 CUL1Q13616 776 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 DHX34Q14147 1143 aaKnown RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 ACAP1Q15027 740 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 SV2CQ496J9 727 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 DPH6Q7L8W6 267 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 KLHL7Q8IXQ5 586 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 SLC4A11Q8NBS3 891 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 C3orf20Q8ND61 904 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 IPO4Q8TEX9 1081 aaKnown RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 PPP1R13LQ8WUF5 828 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 C18orf8Q96DM3 657 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 SYNCQ9H7C4 482 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 GDF3Q9NR23 364 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 FAM53CQ9NYF3 392 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 FEZ2Q9UHY8 353 aaPredicted RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 UTP11Q9Y3A2 253 aaKnown RBP13.31□□□□□ -0.28
NUP85-202ENST00000449421 SQORQ9Y6N5 450 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 ALPK3Q96L96 1907 aa13.31□□□□□ -0.28
NUP85-202ENST00000449421 SMIM28A0A1B0GU29 152 aa13.3□□□□□ -0.28
NUP85-202ENST00000449421 TMEM191CA6NGB0 347 aa13.3□□□□□ -0.28
NUP85-202ENST00000449421 CCDC85CA6NKD9 419 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms