RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DDX53Q86TM3 631 aaKnown RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 TMTC1Q8IUR5 882 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 TDHQ8IZJ6 230 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 OLIG1Q8TAK6 271 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 DDX1Q92499 740 aaKnown RBP14.97□□□□□ -0.01
SHMT2-203ENST00000449049 HERC2P3Q9BVR0 1158 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 KCNF1Q9H3M0 494 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 DPEP3Q9H4B8 488 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 KIAA1257Q9ULG3 409 aa14.97□□□□□ -0.01
SHMT2-203ENST00000449049 SSU72P8A0A1W2PR75 194 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 RRP9O43818 475 aaKnown RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ARHGEF15O94989 841 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 SOD2P04179 222 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 CA3P07451 260 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 PLEKP08567 350 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 GNA15P30679 374 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 BMPR1AP36894 532 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 TDRD12Q587J7 1177 aaKnown RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 VARS2Q5ST30 1063 aaKnown RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 TAS1R1Q7RTX1 841 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ZNF571Q7Z3V5 609 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 TNIP3Q96KP6 325 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ACBD6Q9BR61 282 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 PLVAPQ9BX97 442 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 DNAI2Q9GZS0 605 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 CHST7Q9NS84 486 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 STK39Q9UEW8 545 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 CDH9Q9ULB4 789 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 YBX2Q9Y2T7 364 aaKnown RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 C5orf67F2Z3F1 127 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 FGF18O76093 207 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 CALCAP01258 141 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 PDGFRBP09619 1106 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 VDRP11473 427 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 PCSK1P29120 753 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 USP41Q3LFD5 358 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 RTP2Q5QGT7 225 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 KIAA0319Q5VV43 1072 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ACOT1Q86TX2 421 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ZNF677Q86XU0 584 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 THEM5Q8N1Q8 247 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 SLC20A1Q8WUM9 679 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 B3GALT6Q96L58 329 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 ZSWIM1Q9BR11 485 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 TTPALQ9BTX7 342 aa14.96□□□□□ -0.01
SHMT2-203ENST00000449049 NHEJ1Q9H9Q4 299 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-203ENST00000449049 PLXNA4Q9HCM2 1894 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 CHRNB2P17787 502 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ACAT1P24752 427 aaKnown RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ANXA13P27216 316 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 CTNNB1P35222 781 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 CDR2Q01850 454 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 MLLT1Q03111 559 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ASTE1Q2TB18 679 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 CEP57Q86XR8 500 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 KLHL23Q8NBE8 558 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 B3GALNT2Q8NCR0 500 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 OR10T2Q8NGX3 314 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ZNF606Q8WXB4 792 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 TFAP2BQ92481 460 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 AGPAT1Q99943 283 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 SYT15Q9BQS2 421 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 PBX4Q9BYU1 374 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 SOWAHDA6NJG2 315 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 NRDCO43847 1150 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 TBC1D4O60343 1298 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 BRD2P25440 801 aaKnown RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 EIF4A3P38919 411 aaKnown RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 PBX2P40425 430 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 KRT17Q04695 432 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 RAB30Q15771 203 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ZNF280DQ6N043 979 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 ANKS3Q6ZW76 656 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 HEXIM2Q96MH2 286 aaKnown RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 SAMD11Q96NU1 681 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 PKMYT1Q99640 499 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 C17orf80Q9BSJ5 609 aa14.95□□□□□ -0.02
SHMT2-203ENST00000449049 OXCT2Q9BYC2 517 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-203ENST00000449049 H7C4K7 107 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 THAP12O43422 761 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 CD19P15391 556 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 PTPN1P18031 435 aaKnown RBP14.94□□□□□ -0.02
SHMT2-203ENST00000449049 PSMC1P62191 440 aaKnown RBP14.94□□□□□ -0.02
SHMT2-203ENST00000449049 FMO1Q01740 532 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 DSG1Q02413 1049 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 TAP1Q03518 808 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 INTS6LQ5JSJ4 861 aaKnown RBP14.94□□□□□ -0.02
SHMT2-203ENST00000449049 ARHGAP17Q68EM7 881 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 CCDC170Q8IYT3 715 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 C12orf29Q8N999 325 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 PIK3R5Q8WYR1 880 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 ZNF830Q96NB3 372 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-203ENST00000449049 CRTAC1Q9NQ79 661 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 PUF60Q9UHX1 559 aaKnown RBP14.94□□□□□ -0.02
SHMT2-203ENST00000449049 PCDHGC3Q9UN70 934 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 LZTS1Q9Y250 596 aa14.94□□□□□ -0.02
SHMT2-203ENST00000449049 O00370 1275 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 ARHGAP6O43182 974 aa14.93□□□□□ -0.02
SHMT2-203ENST00000449049 MED7O43513 233 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms