RNA–Protein interactions for RNA: ENST00000448872.6

RCL1-208, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 1 (best) BASIC

Gene RCL1, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-208ENST00000448872 FXR1P51114 621 aaKnown RBP eCLIP12.65□□□□□ -0.38
RCL1-208ENST00000448872 MFAP3P55082 362 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 INCA1Q0VD86 236 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 SMC1AQ14683 1233 aaKnown RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 ZNF280DQ6N043 979 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 ACOT1Q86TX2 421 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 RBM23Q86U06 439 aaKnown RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 VSTM4Q8IW00 320 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 RXFP1Q9HBX9 757 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 ACP6Q9NPH0 428 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 CRTAC1Q9NQ79 661 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 TMLHEQ9NVH6 421 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 STK39Q9UEW8 545 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 BARX2Q9UMQ3 279 aaPredicted RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 PCDHB4Q9Y5E5 795 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 BACE2Q9Y5Z0 518 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 ARHGEF37A1IGU5 675 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 MYBPHLA2RUH7 354 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 H7C4K7 107 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 FOXN3O00409 490 aaPredicted RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 TPM3P06753 285 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 KRT5P13647 590 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 TRIM21P19474 475 aaKnown RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 OR1D2P34982 312 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
RCL1-208ENST00000448872 LHX1P48742 406 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 RAD23BP54727 409 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 DRAP1Q14919 205 aaPredicted RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 TMEM270Q6UE05 265 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 PALB2Q86YC2 1186 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 THEM5Q8N1Q8 247 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 C12orf29Q8N999 325 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 CPLX3Q8WVH0 158 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 MRPL38Q96DV4 380 aaKnown RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 FAXDC2Q96IV6 333 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 PGLYRP2Q96PD5 576 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 KLHL5Q96PQ7 755 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 PKMYT1Q99640 499 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 SYT15Q9BQS2 421 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 TTYH3Q9C0H2 523 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 ZCWPW1Q9H0M4 648 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 LMAN2LQ9H0V9 348 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 NGRNQ9NPE2 291 aaKnown RBP12.65□□□□□ -0.38
RCL1-208ENST00000448872 GTF3C4Q9UKN8 822 aa12.65□□□□□ -0.38
RCL1-208ENST00000448872 OR6C75A6NL08 312 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 F8VZ95 297 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 CITO14578 2027 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 VNN2O95498 520 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 ADCY5O95622 1261 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 FAM163BP0C2L3 166 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 SPATA31D3P0C874 917 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 IGFBP4P22692 258 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 USP8P40818 1118 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 ZNF132P52740 706 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 JAM2P57087 298 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 RBM10P98175 930 aaKnown RBP12.64□□□□□ -0.39
RCL1-208ENST00000448872 ROR1Q01973 937 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 GOLGA8FQ08AF8 430 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 GOLGA8DPQ0D2H9 430 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 PTPROQ16827 1216 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 SLC39A12Q504Y0 691 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 MDH1BQ5I0G3 518 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 INTS6LQ5JSJ4 861 aaKnown RBP12.64□□□□□ -0.39
RCL1-208ENST00000448872 SPECC1LQ69YQ0 1117 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 SLC8B1Q6J4K2 584 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 RNF19BQ6ZMZ0 732 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 SLC4A11Q8NBS3 891 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 RBBP8NLQ8NC74 664 aaPredicted RBP12.64□□□□□ -0.39
RCL1-208ENST00000448872 SHC3Q92529 594 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 BAP1Q92560 729 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 ACBD6Q9BR61 282 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 STK33Q9BYT3 514 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 IRAK3Q9Y616 596 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 MTCH2Q9Y6C9 303 aa12.64□□□□□ -0.39
RCL1-208ENST00000448872 TRANK1O15050 2925 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 WDR27A2RRH5 827 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 CYP26A1O43174 497 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 CLASP2O75122 1294 aaKnown RBP12.63□□□□□ -0.39
RCL1-208ENST00000448872 GYPCP04921 128 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 CPB1P15086 417 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 PTPN1P18031 435 aaKnown RBP12.63□□□□□ -0.39
RCL1-208ENST00000448872 KLRC2P26717 231 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 PCSK1P29120 753 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 SSTR3P32745 418 aaPredicted RBP12.63□□□□□ -0.39
RCL1-208ENST00000448872 NRIP1P48552 1158 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 TCEAL5Q5H9L2 206 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 PDXDC1Q6P996 788 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 ENOSF1Q7L5Y1 443 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 TMC6Q7Z403 805 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 UNC93AQ86WB7 457 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 DEFB123Q8N688 67 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 B3GALNT2Q8NCR0 500 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 MYLIPQ8WY64 445 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 MYLPFQ96A32 169 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 TMEM176AQ96HP8 235 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 MRFAP1L1Q96HT8 127 aa12.63□□□□□ -0.39
RCL1-208ENST00000448872 HEXIM2Q96MH2 286 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms