RNA–Protein interactions for RNA: ENST00000448850.5

APP-210, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 1,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-210ENST00000448850 PCDHB12Q9Y5F1 795 aa15.52■□□□□ 0.07
APP-210ENST00000448850 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
APP-210ENST00000448850 THAP12O43422 761 aa15.51■□□□□ 0.07
APP-210ENST00000448850 FGFR3P22607 806 aa15.51■□□□□ 0.07
APP-210ENST00000448850 PPM1AP35813 382 aa15.51■□□□□ 0.07
APP-210ENST00000448850 YWHAHQ04917 246 aaPredicted RBP15.51■□□□□ 0.07
APP-210ENST00000448850 RAD9BQ6WBX8 426 aa15.51■□□□□ 0.07
APP-210ENST00000448850 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.51■□□□□ 0.07
APP-210ENST00000448850 ACOT1Q86TX2 421 aa15.51■□□□□ 0.07
APP-210ENST00000448850 VPS36Q86VN1 386 aa15.51■□□□□ 0.07
APP-210ENST00000448850 ZNF677Q86XU0 584 aa15.51■□□□□ 0.07
APP-210ENST00000448850 CCDC170Q8IYT3 715 aa15.51■□□□□ 0.07
APP-210ENST00000448850 CRYBG2Q8N1P7 616 aa15.51■□□□□ 0.07
APP-210ENST00000448850 SLC20A1Q8WUM9 679 aa15.51■□□□□ 0.07
APP-210ENST00000448850 DDX1Q92499 740 aaKnown RBP15.51■□□□□ 0.07
APP-210ENST00000448850 TMEM169Q96HH4 297 aa15.51■□□□□ 0.07
APP-210ENST00000448850 TNIP3Q96KP6 325 aa15.51■□□□□ 0.07
APP-210ENST00000448850 HEXIM2Q96MH2 286 aaKnown RBP15.51■□□□□ 0.07
APP-210ENST00000448850 DEF6Q9H4E7 631 aa15.51■□□□□ 0.07
APP-210ENST00000448850 PUF60Q9UHX1 559 aaKnown RBP15.51■□□□□ 0.07
APP-210ENST00000448850 KIAA1257Q9ULG3 409 aa15.51■□□□□ 0.07
APP-210ENST00000448850 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.51■□□□□ 0.07
APP-210ENST00000448850 LAMA2P24043 3122 aaKnown RBP15.51■□□□□ 0.07
APP-210ENST00000448850 VDRP11473 427 aa15.5■□□□□ 0.07
APP-210ENST00000448850 CD19P15391 556 aa15.5■□□□□ 0.07
APP-210ENST00000448850 CHRNB2P17787 502 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ANXA13P27216 316 aa15.5■□□□□ 0.07
APP-210ENST00000448850 CDR2Q01850 454 aa15.5■□□□□ 0.07
APP-210ENST00000448850 MTF1Q14872 753 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ASTE1Q2TB18 679 aaPredicted RBP15.5■□□□□ 0.07
APP-210ENST00000448850 TAF3Q5VWG9 929 aa15.5■□□□□ 0.07
APP-210ENST00000448850 FAM109BQ6ICB4 259 aaPredicted RBP15.5■□□□□ 0.07
APP-210ENST00000448850 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
APP-210ENST00000448850 RNF168Q8IYW5 571 aaPredicted RBP15.5■□□□□ 0.07
APP-210ENST00000448850 THEM5Q8N1Q8 247 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ZNF606Q8WXB4 792 aa15.5■□□□□ 0.07
APP-210ENST00000448850 DPEP3Q9H4B8 488 aa15.5■□□□□ 0.07
APP-210ENST00000448850 MYO9BQ13459 2157 aa15.5■□□□□ 0.07
APP-210ENST00000448850 AKR1B10O60218 316 aa15.5■□□□□ 0.07
APP-210ENST00000448850 OAZ2O95190 189 aa15.5■□□□□ 0.07
APP-210ENST00000448850 MMEP08473 750 aa15.5■□□□□ 0.07
APP-210ENST00000448850 TNFAIP3P21580 790 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ACAT1P24752 427 aaKnown RBP15.5■□□□□ 0.07
APP-210ENST00000448850 BRD2P25440 801 aaKnown RBP15.5■□□□□ 0.07
APP-210ENST00000448850 PCSK1P29120 753 aa15.5■□□□□ 0.07
APP-210ENST00000448850 BMP8BP34820 402 aa15.5■□□□□ 0.07
APP-210ENST00000448850 CYLC1P35663 651 aaPredicted RBP15.5■□□□□ 0.07
APP-210ENST00000448850 KIF11P52732 1056 aa15.5■□□□□ 0.07
APP-210ENST00000448850 BMS1Q14692 1282 aaKnown RBP15.5■□□□□ 0.07
APP-210ENST00000448850 SGO2Q562F6 1265 aa15.5■□□□□ 0.07
APP-210ENST00000448850 VARS2Q5ST30 1063 aaKnown RBP15.5■□□□□ 0.07
APP-210ENST00000448850 OLIG1Q8TAK6 271 aa15.5■□□□□ 0.07
APP-210ENST00000448850 TFAP2BQ92481 460 aa15.5■□□□□ 0.07
APP-210ENST00000448850 RTP3Q9BQQ7 232 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ZSWIM1Q9BR11 485 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ACBD6Q9BR61 282 aa15.5■□□□□ 0.07
APP-210ENST00000448850 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.5■□□□□ 0.07
APP-210ENST00000448850 VN1R3Q9BXE9 311 aa15.5■□□□□ 0.07
APP-210ENST00000448850 ADAMTS1Q9UHI8 967 aa15.5■□□□□ 0.07
APP-210ENST00000448850 CDH9Q9ULB4 789 aa15.5■□□□□ 0.07
APP-210ENST00000448850 EPN1Q9Y6I3 576 aaPredicted RBP15.5■□□□□ 0.07
APP-210ENST00000448850 LINC01553A4QN01 128 aa15.49■□□□□ 0.07
APP-210ENST00000448850 MED7O43513 233 aa15.49■□□□□ 0.07
APP-210ENST00000448850 FMO1Q01740 532 aa15.49■□□□□ 0.07
APP-210ENST00000448850 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
APP-210ENST00000448850 USP41Q3LFD5 358 aa15.49■□□□□ 0.07
APP-210ENST00000448850 TAS1R1Q7RTX1 841 aa15.49■□□□□ 0.07
APP-210ENST00000448850 GLYCTKQ8IVS8 523 aa15.49■□□□□ 0.07
APP-210ENST00000448850 C12orf29Q8N999 325 aa15.49■□□□□ 0.07
APP-210ENST00000448850 B3GALNT2Q8NCR0 500 aa15.49■□□□□ 0.07
APP-210ENST00000448850 LNX1Q8TBB1 728 aaPredicted RBP15.49■□□□□ 0.07
APP-210ENST00000448850 B3GALT6Q96L58 329 aa15.49■□□□□ 0.07
APP-210ENST00000448850 SYT15Q9BQS2 421 aa15.49■□□□□ 0.07
APP-210ENST00000448850 TTPALQ9BTX7 342 aa15.49■□□□□ 0.07
APP-210ENST00000448850 RWDD3Q9Y3V2 267 aa15.49■□□□□ 0.07
APP-210ENST00000448850 PCDHA11Q9Y5I1 949 aa15.49■□□□□ 0.07
APP-210ENST00000448850 A0A087X0T9 212 aa15.48■□□□□ 0.07
APP-210ENST00000448850 ATP2C2O75185 946 aa15.48■□□□□ 0.07
APP-210ENST00000448850 NDUFA10O95299 355 aa15.48■□□□□ 0.07
APP-210ENST00000448850 SOD2P04179 222 aa15.48■□□□□ 0.07
APP-210ENST00000448850 FAM228BP0C875 321 aa15.48■□□□□ 0.07
APP-210ENST00000448850 MYOGP15173 224 aa15.48■□□□□ 0.07
APP-210ENST00000448850 PTPN1P18031 435 aaKnown RBP15.48■□□□□ 0.07
APP-210ENST00000448850 PSMC1P62191 440 aaKnown RBP15.48■□□□□ 0.07
APP-210ENST00000448850 SLC18A3Q16572 532 aa15.48■□□□□ 0.07
APP-210ENST00000448850 RTP2Q5QGT7 225 aa15.48■□□□□ 0.07
APP-210ENST00000448850 DDX53Q86TM3 631 aaKnown RBP15.48■□□□□ 0.07
APP-210ENST00000448850 SLC30A5Q8TAD4 765 aa15.48■□□□□ 0.07
APP-210ENST00000448850 SPTLC3Q9NUV7 552 aa15.48■□□□□ 0.07
APP-210ENST00000448850 SEPT11Q9NVA2 429 aaKnown RBP15.48■□□□□ 0.07
APP-210ENST00000448850 RANBP2P49792 3224 aaKnown RBP15.48■□□□□ 0.07
APP-210ENST00000448850 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.47■□□□□ 0.07
APP-210ENST00000448850 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.47■□□□□ 0.07
APP-210ENST00000448850 EIF3CLB5ME19 914 aaKnown RBP15.47■□□□□ 0.07
APP-210ENST00000448850 DDX3XO00571 662 aaKnown RBP eCLIP15.47■□□□□ 0.07
APP-210ENST00000448850 FGF18O76093 207 aa15.47■□□□□ 0.07
APP-210ENST00000448850 LCA5LO95447 670 aa15.47■□□□□ 0.07
APP-210ENST00000448850 BMPR1AP36894 532 aa15.47■□□□□ 0.07
APP-210ENST00000448850 PLCB3Q01970 1234 aa15.47■□□□□ 0.07
APP-210ENST00000448850 KRT17Q04695 432 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms