RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312	TMEM62	Q0P6H9	643 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	NFX1	Q12986	1120 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	NPNT	Q6UXI9	565 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ZCCHC23	Q6ZST2	131 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	NLRX1	Q86UT6	975 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	MCUR1	Q96AQ8	359 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	MASTL	Q96GX5	879 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	EBF2	Q9HAK2	575 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	APOBEC3G	Q9HC16	384 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	DNAAF2	Q9NVR5	837 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	MEI4	A8MW99	385 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	USP1	O94782	785 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	VIL1	P09327	827 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	BGN	P21810	368 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	GTF2H1	P32780	548 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	PTDSS1	P48651	473 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	TSHZ1	Q6ZSZ6	1077 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	PALM2	Q8IXS6	379 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	FAM71D	Q8N9W8	422 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	FBXO27	Q8NI29	283 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	DDX1	Q92499	740 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	MAGEB18	Q96M61	343 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ARHGEF3	Q9NR81	526 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	ZFAT	Q9P243	1243 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	RIPK3	Q9Y572	518 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	WASF2	Q9Y6W5	498 aa		13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.2	□□□□□ -0.3
DDR1-238	ENST00000446312	PLIN4	Q96Q06	1357 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	ENO1	P06733	434 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	LINGO3	P0C6S8	592 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	ATP5D	P30049	168 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	CA8	P35219	290 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	PSMC5	P62195	406 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	PPP1R15B	Q5SWA1	713 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	FNBP1L	Q5T0N5	605 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	MOXD1	Q6UVY6	613 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	BTNL9	Q6UXG8	535 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	TMEM161B	Q8NDZ6	487 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	AGR3	Q8TD06	166 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	MIPOL1	Q8TD10	442 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	PYROXD1	Q8WU10	500 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	WHRN	Q9P202	907 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	MRPL42	Q9Y6G3	142 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	MAPK13	O15264	365 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	GSTA1	P08263	222 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	POLG	P54098	1239 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	OGDH	Q02218	1023 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	MPP3	Q13368	585 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	BAAT	Q14032	418 aa	Predicted RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	VPS72	Q15906	364 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	GALNTL6	Q49A17	601 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	TDRD10	Q5VZ19	366 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	RHBDF2	Q6PJF5	856 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	ALYREF	Q86V81	257 aa	Known RBP	13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	CCDC89	Q8N998	374 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	CHURC1	Q8WUH1	139 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	GMCL1	Q96IK5	515 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	PPP1R36	Q96LQ0	422 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	PGLYRP2	Q96PD5	576 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	SMYD3	Q9H7B4	428 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	SYNC	Q9H7C4	482 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	SEL1L	Q9UBV2	794 aa		13.19	□□□□□ -0.3
DDR1-238	ENST00000446312	hCG_2014768	A0A024R1R8	64 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	FAM237B	A0A1B0GVD1	139 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CYB561D2	O14569	222 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ZNF862	O60290	1169 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PEX11A	O75192	247 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GJB1	P08034	283 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	T-ENOL	P0DO92	83 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TNFSF9	P41273	254 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CYP24A1	Q07973	514 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MAMLD1	Q13495	774 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PEX6	Q13608	980 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	DLGAP5	Q15398	846 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	C1orf228	Q6PIY5	440 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	FOXR2	Q6PJQ5	311 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PPP1R13L	Q8WUF5	828 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ZNF75CP	Q92670	426 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CNKSR1	Q969H4	720 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CCDC124	Q96CT7	223 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ACAP3	Q96P50	834 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GPATCH2L	Q9NWQ4	482 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	RHBDL2	Q9NX52	303 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	NUB1	Q9Y5A7	615 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SPATA31A6	Q5VVP1	1343 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	OAS1	P00973	400 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CST3	P01034	146 aa	Predicted RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	SRGAP2C	P0DJJ0	459 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GZMA	P12544	262 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GCA	P28676	217 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	ALDH3A1	P30838	453 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	GBP1	P32455	592 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	CDH8	P55286	799 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TFAM	Q00059	246 aa	Known RBP	13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	MMRN1	Q13201	1228 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TATDN1	Q6P1N9	297 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	PPP1R21	Q6ZMI0	780 aa		13.18	□□□□□ -0.3
DDR1-238	ENST00000446312	TRABD2A	Q86V40	505 aa		13.18	□□□□□ -0.3

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