RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 NUCKS1Q9H1E3 243 aaKnown RBP18.57■□□□□ 0.56
SGCE-206ENST00000445866 MRPL17Q9NRX2 175 aaKnown RBP18.57■□□□□ 0.56
SGCE-206ENST00000445866 CNTN6Q9UQ52 1028 aa18.57■□□□□ 0.56
SGCE-206ENST00000445866 GRM6O15303 877 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 URODP06132 367 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 CA8P35219 290 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 RAD23BP54727 409 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 ERVFC1P60507 584 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 SFMBT2Q5VUG0 894 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 PIK3R5Q8WYR1 880 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 TNIP3Q96KP6 325 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 TWNKQ96RR1 684 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 RTP3Q9BQQ7 232 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 HMGXB4Q9UGU5 601 aa18.56■□□□□ 0.56
SGCE-206ENST00000445866 PDE4DIPQ5VU43 2346 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 ATP2C2O75185 946 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CSPG5O95196 566 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CTSAP10619 480 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 PTPN1P18031 435 aaKnown RBP18.55■□□□□ 0.56
SGCE-206ENST00000445866 DNAJB1P25685 340 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CLCN1P35523 988 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 BPIFB4P59827 614 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 PTK2Q05397 1052 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 ZNF280DQ6N043 979 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CNGA4Q8IV77 575 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CRYBG2Q8N1P7 616 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 SLC4A11Q8NBS3 891 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 TCF25Q9BQ70 676 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 DPEP3Q9H4B8 488 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 ENTPD7Q9NQZ7 604 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 CDH9Q9ULB4 789 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 SSX2IPQ9Y2D8 614 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 NME7Q9Y5B8 376 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 LAMA3Q16787 3333 aa18.55■□□□□ 0.56
SGCE-206ENST00000445866 OR6C75A6NL08 312 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 CALCAP01258 141 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 CCDC172P0C7W6 258 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 CD19P15391 556 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 ARPP19P56211 112 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 TSPY1Q01534 308 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 PSMD5Q16401 504 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 FMNL3Q8IVF7 1028 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 LPIN3Q9BQK8 851 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 OXCT2Q9BYC2 517 aaPredicted RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 ZBP1Q9H171 429 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 ZNF576Q9H609 170 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 ACP6Q9NPH0 428 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 ZNHIT6Q9NWK9 470 aaKnown RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 AIPL1Q9NZN9 384 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 KIAA1257Q9ULG3 409 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 MFAP3LO75121 409 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 PAEPP09466 180 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 FERP16591 822 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 RPL17P18621 184 aaKnown RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 CDR1P51861 262 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 ZNF132P52740 706 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 PSMC1P62191 440 aaKnown RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 ASIC2Q16515 512 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 SMYD5Q6GMV2 418 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 IRF2BP2Q7Z5L9 587 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 SLC47A2Q86VL8 602 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 C12orf29Q8N999 325 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 B3GALNT2Q8NCR0 500 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 OR10T2Q8NGX3 314 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 SYN2Q92777 582 aaPredicted RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 TMEM209Q96SK2 561 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 SYT15Q9BQS2 421 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 NGRNQ9NPE2 291 aaKnown RBP18.54■□□□□ 0.56
SGCE-206ENST00000445866 TLR9Q9NR96 1032 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 GTF3C4Q9UKN8 822 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 BACE2Q9Y5Z0 518 aa18.54■□□□□ 0.56
SGCE-206ENST00000445866 MYBPHLA2RUH7 354 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 RFXAPO00287 272 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 TBC1D4O60343 1298 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 LPXNO60711 386 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 LILRB3O75022 631 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 OR1D2P34982 312 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 RSPO2Q6UXX9 243 aaPredicted RBP18.53■□□□□ 0.56
SGCE-206ENST00000445866 CCDC186Q7Z3E2 898 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 LRRTM3Q86VH5 581 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 GPR65Q8IYL9 337 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 DCP1BQ8IZD4 617 aaKnown RBP18.53■□□□□ 0.56
SGCE-206ENST00000445866 MRPL43Q8N983 215 aaKnown RBP18.53■□□□□ 0.56
SGCE-206ENST00000445866 TC2NQ8N9U0 490 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 DNAJC7Q99615 494 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 CLSTN3Q9BQT9 956 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.53■□□□□ 0.56
SGCE-206ENST00000445866 MTRRQ9UBK8 725 aa18.53■□□□□ 0.56
SGCE-206ENST00000445866 OR4Q2P0C623 313 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 SKILP12757 684 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 PTPN14Q15678 1187 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 MDH1BQ5I0G3 518 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 INTS6LQ5JSJ4 861 aaKnown RBP18.52■□□□□ 0.56
SGCE-206ENST00000445866 PLPP4Q5VZY2 271 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 GLYCTKQ8IVS8 523 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 ZCWPW1Q9H0M4 648 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 ABHD10Q9NUJ1 306 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 CDY1Q9Y6F8 540 aa18.52■□□□□ 0.56
SGCE-206ENST00000445866 CITO14578 2027 aa18.51■□□□□ 0.55
SGCE-206ENST00000445866 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms