RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 AP1B1Q10567 949 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 PTK6Q13882 451 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 PGM5Q15124 567 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 TTC39BQ5VTQ0 682 aaPredicted RBP17.44■□□□□ 0.38
TCOF1-206ENST00000445265 KLC3Q6P597 504 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 TEX9Q8N6V9 391 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 NSL1Q96IY1 281 aa17.44■□□□□ 0.38
TCOF1-206ENST00000445265 PRMT7Q9NVM4 692 aaPredicted RBP17.44■□□□□ 0.38
TCOF1-206ENST00000445265 ARHGEF37A1IGU5 675 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 PPP1R11O60927 126 aaPredicted RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ENO1P06733 434 aaKnown RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 TXNP10599 105 aaKnown RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 HIC1Q14526 733 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 BOLA3Q53S33 107 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 NLRP9Q7RTR0 991 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 PRELID2Q8N945 189 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 METTL5Q9NRN9 209 aaKnown RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 LOC102724159A0A0B4J2E5 919 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 M0R2N6 131 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 PPP1R12AO14974 1030 aaPredicted RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 KDSRQ06136 332 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 PWP2Q15269 919 aaKnown RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ITPRIPL1Q6GPH6 555 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ZNF572Q7Z3I7 529 aaPredicted RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 FAM71AQ8IYT1 594 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ARMC2Q8NEN0 867 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 GSDMBQ8TAX9 411 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 MMP19Q99542 508 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 NT5C1AQ9BXI3 368 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ATP8B3O60423 1300 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 CRY2Q49AN0 593 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 FUKQ8N0W3 1084 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 BBS5Q8N3I7 341 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ACSF2Q96CM8 615 aaPredicted RBP17.43■□□□□ 0.38
TCOF1-206ENST00000445265 WDR18Q9BV38 432 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 PCDH9Q9HC56 1237 aa17.43■□□□□ 0.38
TCOF1-206ENST00000445265 ASB14A6NK59 587 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DNAJC8O75937 253 aaPredicted RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 PAMP19021 973 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 TARSP26639 723 aaKnown RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 SYCP2LQ5T4T6 812 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 LRRC6Q86X45 466 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 ZNF560Q96MR9 790 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 AGPSO00116 658 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 ADORA2BP29275 332 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 TM4SF1P30408 202 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 SEPT6Q14141 434 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DSTYKQ6XUX3 929 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DNAJC9Q8WXX5 260 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 KAT5Q92993 513 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DEFB129Q9H1M3 183 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 NINJ2Q9NZG7 142 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 NVLO15381 856 aaKnown RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 NPM3O75607 178 aaKnown RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 ATP6V1G2O95670 118 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 RGS7P49802 495 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DLG4P78352 724 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 GTF2BQ00403 316 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 OTUD4Q01804 1114 aaKnown RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 RGS9BPQ6ZS82 235 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 PID1Q7Z2X4 250 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 MCUQ8NE86 351 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 TAC1P20366 129 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 VCPP55072 806 aaKnown RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 SESN2P58004 480 aaPredicted RBP17.42■□□□□ 0.38
TCOF1-206ENST00000445265 MTM1Q13496 603 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 RASSF3Q86WH2 238 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 YY1AP1Q9H869 796 aa17.42■□□□□ 0.38
TCOF1-206ENST00000445265 DNALI1O14645 258 aaPredicted RBP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 MAGEB2O15479 319 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 CYP1A2P05177 515 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 TRADDQ15628 312 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 NFIL3Q16649 462 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 FBXO36Q8NEA4 188 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 SHC3Q92529 594 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 E2F7Q96AV8 911 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 TNIP3Q96KP6 325 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 MTMR12Q9C0I1 747 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 FIS1Q9Y3D6 152 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 SNX9Q9Y5X1 595 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 ANP32DO95626 131 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 RPS12P25398 132 aaKnown RBP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 TRIM49D1C9J1S8 452 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 ALDH18A1P54886 795 aaKnown RBP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 JADE1Q6IE81 842 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 TMEM121Q9BTD3 319 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 KIAA1683Q9H0B3 1180 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 SLC24A3Q9HC58 644 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 VAV3Q9UKW4 847 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 ATXN2Q99700 1313 aaKnown RBP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 B2RBV5 119 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 PIK3R2O00459 728 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 WDR49Q8IV35 697 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 DTX3LQ8TDB6 740 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 UPF3AQ9H1J1 476 aaKnown RBP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 LRRC19Q9H756 370 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.41■□□□□ 0.38
TCOF1-206ENST00000445265 PCMTD2Q9NV79 361 aa17.41■□□□□ 0.38
TCOF1-206ENST00000445265 TISP43B9A030 160 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms