RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 GTF2H1P32780 548 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 PIK3CAP42336 1068 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 MXI1P50539 228 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 PSMC1P62191 440 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 NOP14P78316 857 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 CBX2Q14781 532 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 DCAF17Q5H9S7 520 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 FRMD5Q7Z6J6 570 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 USP37Q86T82 979 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 STKLD1Q8NE28 680 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 WHAMMQ8TF30 809 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 TWNKQ96RR1 684 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 ARID3AQ99856 593 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 PRKD2Q9BZL6 878 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 HSD3B7Q9H2F3 369 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 ZDHHC7Q9NXF8 308 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 DDX43Q9NXZ2 648 aaKnown RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 CEP72Q9P209 647 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 ARMCX3Q9UH62 379 aaPredicted RBP13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 YIPF1Q9Y548 306 aa13.77□□□□□ -0.21
PDLIM2-212ENST00000443561 LOC730098B7Z3J9 87 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 HUS1O60921 280 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 PHACTR2O75167 634 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 POU2F2P09086 479 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 CCR2P41597 374 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 FMO5P49326 533 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 GPR15P49685 360 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 ITIH3Q06033 890 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 MYO1EQ12965 1108 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 DUSP4Q13115 394 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 TRPC3Q13507 836 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SLC5A9Q2M3M2 681 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SLC39A12Q504Y0 691 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 TPGS2Q68CL5 300 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 KRT39Q6A163 491 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 CAVIN1Q6NZI2 390 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 FAM171BQ6P995 826 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 DPH6Q7L8W6 267 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 TMEM86AQ8N2M4 240 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 UBR7Q8N806 425 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SPATA18Q8TC71 538 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SMG7Q92540 1137 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 TATDN2Q93075 761 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SYAP1Q96A49 352 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 CNOT6LQ96LI5 555 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 LRRC3Q9BY71 257 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 DNMT3BQ9UBC3 853 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 NXF1Q9UBU9 619 aaKnown RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 KIF26AQ9ULI4 1882 aaPredicted RBP13.76□□□□□ -0.21
PDLIM2-212ENST00000443561 CLUHO75153 1309 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 MYH10P35580 1976 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 MOSPD3O75425 235 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 SRGAP2BP0DMP2 458 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 SP100P23497 879 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 ERCC5P28715 1186 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 CACNA2D1P54289 1103 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 ORC1Q13415 861 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 NCAPHQ15003 741 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 AAK1Q2M2I8 961 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 KLHL40Q2TBA0 621 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 CCDC40Q4G0X9 1142 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 ZNF667Q5HYK9 610 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 TCERG1LQ5VWI1 586 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 DPY19L2P1Q6NXN4 242 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 PAQR9Q6ZVX9 377 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 TMC8Q8IU68 726 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 HS6ST3Q8IZP7 471 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 KAT5Q92993 513 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 SYT15Q9BQS2 421 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 ACBD6Q9BR61 282 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 CYP4F11Q9HBI6 524 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 SAMSN1Q9NSI8 373 aaKnown RBP13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 GTF3C4Q9UKN8 822 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 NUP210Q8TEM1 1887 aaPredicted RBP13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 COL4A2P08572 1712 aa13.75□□□□□ -0.21
PDLIM2-212ENST00000443561 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 BDP1A6H8Y1 2624 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 C2CD4DB7Z1M9 353 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PMM2O15305 246 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PDGFRBP09619 1106 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 HNRNPA1P09651 372 aaKnown RBP eCLIP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 APBA1Q02410 837 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 TYRO3Q06418 890 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 INCA1Q0VD86 236 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 TWF1Q12792 350 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 UVSSAQ2YD98 709 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PUS10Q3MIT2 529 aaKnown RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 HSP90AA4PQ58FG1 418 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 MIIPQ5JXC2 388 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PRSS36Q5K4E3 855 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 PPM1LQ5SGD2 360 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 GRASPQ7Z6J2 395 aaPredicted RBP13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 METTL23Q86XA0 190 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 ADHFE1Q8IWW8 467 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 FBXL13Q8NEE6 735 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 ITFG1Q8TB96 612 aa13.74□□□□□ -0.21
PDLIM2-212ENST00000443561 MYLPFQ96A32 169 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms