RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 IER5LQ5T953 404 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 CEP135Q66GS9 1140 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 ITIH5Q86UX2 942 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 TMC8Q8IU68 726 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 SHKBP1Q8TBC3 707 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 SPPL2BQ8TCT7 592 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 MMS19Q96T76 1030 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 GZF1Q9H116 711 aaPredicted RBP22.6■■□□□ 1.21
CDKN3-204ENST00000442975 ARHGEF3Q9NR81 526 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 TMLHEQ9NVH6 421 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 HSFX1Q9UBD0 423 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 ARIH1Q9Y4X5 557 aaPredicted RBP22.6■■□□□ 1.21
CDKN3-204ENST00000442975 PCDHB5Q9Y5E4 795 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 SCN1AP35498 2009 aa22.6■■□□□ 1.21
CDKN3-204ENST00000442975 A0A1W2PRU2 124 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PDXKO00764 312 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PHACTR2O75167 634 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 ATF6P18850 670 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PCSK1P29120 753 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 TNNC1P63316 161 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PNOCQ13519 176 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 TAF12Q16514 161 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 NFE2Q16621 373 aaPredicted RBP22.59■■□□□ 1.21
CDKN3-204ENST00000442975 CCDC142Q17RM4 750 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 INTS6LQ5JSJ4 861 aaKnown RBP22.59■■□□□ 1.21
CDKN3-204ENST00000442975 FAM78AQ5JUQ0 283 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 CWF19L1Q69YN2 538 aaKnown RBP22.59■■□□□ 1.21
CDKN3-204ENST00000442975 FMR1NBQ8N0W7 255 aaPredicted RBP22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PLEKHO2Q8TD55 490 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 GIPC2Q8TF65 315 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PSMG2Q969U7 264 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 ACBD6Q9BR61 282 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 PI4K2AQ9BTU6 479 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 ZNF334Q9HCZ1 680 aaPredicted RBP22.59■■□□□ 1.21
CDKN3-204ENST00000442975 SLC2A4RGQ9NR83 387 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 WNT16Q9UBV4 365 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 ASB3Q9Y575 518 aa22.59■■□□□ 1.21
CDKN3-204ENST00000442975 DOCK8Q8NF50 2099 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 MOSPD3O75425 235 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 MICAL2O94851 1124 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 HAPLN1P10915 354 aaPredicted RBP22.58■■□□□ 1.21
CDKN3-204ENST00000442975 LHX1P48742 406 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 PSMC1P62191 440 aaKnown RBP22.58■■□□□ 1.21
CDKN3-204ENST00000442975 GPC5P78333 572 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 ASTLQ6HA08 431 aaPredicted RBP22.58■■□□□ 1.21
CDKN3-204ENST00000442975 POTEHQ6S545 545 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 DNAJB7Q7Z6W7 309 aaPredicted RBP22.58■■□□□ 1.21
CDKN3-204ENST00000442975 SLC9A9Q8IVB4 645 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 TMEM105Q8N8V8 129 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 SPATA18Q8TC71 538 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 ZSWIM3Q96MP5 696 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 DMAC2Q9NW81 257 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 FRMD4BQ9Y2L6 1034 aa22.58■■□□□ 1.21
CDKN3-204ENST00000442975 KRBA1A5PL33 1030 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 LRRIQ3A6PVS8 624 aaPredicted RBP22.57■■□□□ 1.2
CDKN3-204ENST00000442975 ECI2O75521 394 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 FAM160A1Q05DH4 1040 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 KCNB1Q14721 858 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 TANGO2Q6ICL3 276 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 SMYD4Q8IYR2 804 aaPredicted RBP22.57■■□□□ 1.2
CDKN3-204ENST00000442975 PRSS33Q8NF86 280 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 ZSCAN18Q8TBC5 510 aaPredicted RBP22.57■■□□□ 1.2
CDKN3-204ENST00000442975 KBTBD7Q8WVZ9 684 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 ZNF516Q92618 1163 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 SMARCD2Q92925 531 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 ASB16Q96NS5 453 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 GCNAQ96QF7 691 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 SYT15Q9BQS2 421 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 LRRC3Q9BY71 257 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 KCNH6Q9H252 994 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 GTF3C4Q9UKN8 822 aa22.57■■□□□ 1.2
CDKN3-204ENST00000442975 CST3P01034 146 aaPredicted RBP22.56■■□□□ 1.2
CDKN3-204ENST00000442975 FCARP24071 287 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 NR2F2P24468 414 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 GABRR2P28476 465 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 GPR15P49685 360 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 MYL6P60660 151 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 GRM2Q14416 872 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 STXBP5Q5T5C0 1151 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 TDRD10Q5VZ19 366 aaKnown RBP22.56■■□□□ 1.2
CDKN3-204ENST00000442975 SPATA2LQ8IUW3 424 aaPredicted RBP22.56■■□□□ 1.2
CDKN3-204ENST00000442975 ELSPBP1Q96BH3 223 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 SNX25Q9H3E2 840 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 ATXN3LQ9H3M9 355 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 TBC1D17Q9HA65 648 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 ZFP14Q9HCL3 533 aa22.56■■□□□ 1.2
CDKN3-204ENST00000442975 NXF1Q9UBU9 619 aaKnown RBP22.56■■□□□ 1.2
CDKN3-204ENST00000442975 WDFY4Q6ZS81 3184 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 ZNF318Q5VUA4 2279 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 GABRDO14764 452 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 FGF19O95750 216 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 PDGFRBP09619 1106 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 NPR3P17342 541 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 SNW1Q13573 536 aaKnown RBP22.55■■□□□ 1.2
CDKN3-204ENST00000442975 ZNF699Q32M78 642 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 WDR72Q3MJ13 1102 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 SDHAF4Q5VUM1 108 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 DPH6Q7L8W6 267 aa22.55■■□□□ 1.2
CDKN3-204ENST00000442975 GUF1Q8N442 669 aaKnown RBP22.55■■□□□ 1.2
CDKN3-204ENST00000442975 STKLD1Q8NE28 680 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms