RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 CRISPLD2Q9H0B8 497 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 SMYD3Q9H7B4 428 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 CPSF2Q9P2I0 782 aaKnown RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 SALL4Q9UJQ4 1053 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 A0A0A6YYK5 440 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 ANO9A1A5B4 782 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 EME2A4GXA9 379 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 MEIS3P2A8K0S8 358 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 BUB1O43683 1085 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 PQBP1O60828 265 aaKnown RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 CALCAP01258 141 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 MLH1P40692 756 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 PNPLA4P41247 253 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 ATN1P54259 1190 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 MBTPS1Q14703 1052 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 PKN2Q16513 984 aaKnown RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 AGMOQ6ZNB7 445 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 N4BP2L2Q92802 583 aaPredicted RBP8.59□□□□□ -1.03
CCDC39-201ENST00000442201 LPPQ93052 612 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 SNX9Q9Y5X1 595 aa8.59□□□□□ -1.03
CCDC39-201ENST00000442201 PITPNM1O00562 1244 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 PIRO00625 290 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 PPEF2O14830 753 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 THP07101 528 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SETSIPP0DME0 302 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 IBSPP21815 317 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CLEC16AQ2KHT3 1053 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 LRRN4CLQ8ND94 238 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 ZNF606Q8WXB4 792 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 PPP1R10Q96QC0 940 aaKnown RBP8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SDCBP2Q9H190 292 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 RSAD1Q9HA92 442 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 UBN1Q9NPG3 1134 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CHCHD3Q9NX63 227 aaKnown RBP8.58□□□□□ -1.04
CCDC39-201ENST00000442201 TADA3O75528 432 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 PAEPP09466 180 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CD19P15391 556 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SOX4Q06945 474 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-201ENST00000442201 ACAD10Q6JQN1 1059 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 RFFLQ8WZ73 363 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 ARMC5Q96C12 935 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 FTHL17Q9BXU8 183 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 GOLGA2P5Q9HBQ8 144 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CEP350Q5VT06 3117 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 ARL5CA6NH57 179 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 DCDC2CA8MYV0 355 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CHUKO15111 745 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 CILPO75339 1184 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 LRPAP1P30533 357 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 TAF6P49848 677 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 LBX1P52954 281 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 GPC5P78333 572 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SV2CQ496J9 727 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 PPP1R2P3Q6NXS1 205 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SLC39A5Q6ZMH5 540 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 SLC24A5Q71RS6 500 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 ECHDC2Q86YB7 292 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 GSTCDQ8NEC7 633 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 THAP2Q9H0W7 228 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 RGS18Q9NS28 235 aa8.58□□□□□ -1.04
CCDC39-201ENST00000442201 BARX2Q9UMQ3 279 aaPredicted RBP8.58□□□□□ -1.04
CCDC39-201ENST00000442201 DNAH12Q6ZR08 3092 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 FAM170AA1A519 330 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 EFCAB8A8MWE9 144 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 KPNA7A9QM74 516 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 CYP1A1P04798 512 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 UNGP13051 313 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 NSFP46459 744 aaKnown RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 SCNN1GP51170 649 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 RAD23BP54727 409 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 INCA1Q0VD86 236 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 ANKRD33Q7Z3H0 272 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 RHOT2Q8IXI1 618 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 CYFIP2Q96F07 1278 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 TSPYL2Q9H2G4 693 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 HOMER3Q9NSC5 361 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 BLOC1S6Q9UL45 172 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 NCANO14594 1321 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 ANK1P16157 1881 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 C9IYK1 514 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 ENC1O14682 589 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 MED7O43513 233 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 SEC31AO94979 1220 aaKnown RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 CTCFP49711 727 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 MNX1P50219 401 aaPredicted RBP8.57□□□□□ -1.04
CCDC39-201ENST00000442201 TUBB2AQ13885 445 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 NAA35Q5VZE5 725 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 PASD1Q8IV76 773 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 WHAMMQ8TF30 809 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 TMEM176AQ96HP8 235 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 TUBB2BQ9BVA1 445 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 GDAP2Q9NXN4 497 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
CCDC39-201ENST00000442201 PALMO75781 387 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 EOMESO95936 686 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 KCNA4P22459 653 aa8.56□□□□□ -1.04
CCDC39-201ENST00000442201 AFF1P51825 1210 aaKnown RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms