RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 TRPC3Q13507 836 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 EFR3AQ14156 821 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ACAP1Q15027 740 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 MAPKAPK3Q16644 382 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ATP2B3Q16720 1220 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF827Q17R98 1081 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 CRB2Q5IJ48 1285 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 CC2D1BQ5T0F9 858 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 SPATA1Q5VX52 437 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ARMC3Q5W041 872 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ARL6IP4Q66PJ3 421 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PDXDC1Q6P996 788 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 FASTKD5Q7L8L6 764 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 CCDC117Q8IWD4 279 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 OR8H2Q8N162 312 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 THAP4Q8WY91 577 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 CENPIQ92674 756 aaPredicted RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 DDX23Q9BUQ8 820 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PACSIN1Q9BY11 444 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 KCNH6Q9H252 994 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PLEKHA5Q9HAU0 1116 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PCMTD2Q9NV79 361 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 TMEM160Q9NX00 188 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 FAM184BQ9ULE4 1060 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 MTO1Q9Y2Z2 717 aaKnown RBP4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 PLEKHM1Q9Y4G2 1056 aa4.65□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF785A8K8V0 405 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MYO1CO00159 1063 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SLC43A1O75387 559 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MTHFD1P11586 935 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 NPPBP16860 134 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 CASRP41180 1078 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MLLT6P55198 1093 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 DCAF7P61962 342 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 FSTL1Q12841 308 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MAPK7Q13164 816 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ALDH1L2Q3SY69 923 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 FYB2Q5VWT5 728 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ITPRIPL1Q6GPH6 555 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 INTS5Q6P9B9 1019 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 DSTYKQ6XUX3 929 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 UBE3BQ7Z3V4 1068 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 FRMD5Q7Z6J6 570 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SIAH1Q8IUQ4 282 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 CCDC28AQ8IWP9 274 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 RTKN2Q8IZC4 609 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 CSGALNACT1Q8TDX6 532 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ADAMTS18Q8TE60 1221 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 RSPH1Q8WYR4 309 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ANP32BQ92688 251 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 COG8Q96MW5 612 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 C11orf84Q9BUA3 381 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MS4A7Q9GZW8 240 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ALDH8A1Q9H2A2 487 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 TAF1DQ9H5J8 278 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 JMJD4Q9H9V9 463 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SMYD2Q9NRG4 433 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 RLIMQ9NVW2 624 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 AASSQ9UDR5 926 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 M0QYG6 137 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ABLIM1O14639 778 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ETV4P43268 484 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF135P52742 658 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 AP2B1P63010 937 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 UBE3AQ05086 875 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 OTUD7BQ6GQQ9 843 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 ZNF365Q70YC5 407 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SLC35B2Q8TB61 432 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 NDC1Q9BTX1 674 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 MRI1Q9BV20 369 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 AGXT2Q9BYV1 514 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 TINAGL1Q9GZM7 467 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 KIAA1683Q9H0B3 1180 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SLC6A17Q9H1V8 727 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 EPS8L2Q9H6S3 715 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 SEPSECSQ9HD40 501 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 OLA1Q9NTK5 396 aaKnown RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 IRAK4Q9NWZ3 460 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 XPR1Q9UBH6 696 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 RGS17Q9UGC6 210 aaPredicted RBP4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 BICRAQ9NZM4 1560 aa4.64□□□□□ -1.67
CDC42BPA-207ENST00000441725 UNC13AQ9UPW8 1703 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 IRS2Q9Y4H2 1338 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 H7C4K7 107 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 DNPH1O43598 174 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 CHGBP05060 677 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 PIM1P11309 404 aaPredicted RBP4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 IDEP14735 1019 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 ACVR2AP27037 513 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 MRE11P49959 708 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 DUSP8Q13202 625 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 SLC29A2Q14542 456 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 PCOLCEQ15113 449 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 HSP90AB3PQ58FF7 597 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 FAM47AQ5JRC9 791 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 FCRL6Q6DN72 434 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 SEM1Q6ZVN7 128 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 USP37Q86T82 979 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 DTX1Q86Y01 620 aa4.63□□□□□ -1.67
CDC42BPA-207ENST00000441725 PDSS2Q86YH6 399 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms