RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 NDC80O14777 642 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 RNF8O76064 485 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 HEXIM1O94992 359 aaKnown RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 CTGFP29279 349 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 RAP1GAPP47736 663 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 NDST1P52848 882 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 RNASE9P60153 205 aaKnown RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 PSMC1P62191 440 aaKnown RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 NNTQ13423 1086 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 ITGA7Q13683 1181 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 LRRC38Q5VT99 294 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 GDF6Q6KF10 455 aaPredicted RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 METTL23Q86XA0 190 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 ELMO3Q96BJ8 720 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 MS4A14Q96JA4 679 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 PKNOX2Q96KN3 472 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 CDHR5Q9HBB8 845 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 FAM105AQ9NUU6 356 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 CCND3P30281 292 aaPredicted RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 RPL9P32969 192 aaKnown RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 ACADSBP45954 432 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 ACLYP53396 1101 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 VSNL1P62760 191 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 HLTFQ14527 1009 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS50-205ENST00000441602 SMC1AQ14683 1233 aaKnown RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 ACAP1Q15027 740 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 PTPROQ16827 1216 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 UBXN11Q5T124 520 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 DENND1BQ6P3S1 775 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 LCLAT1Q6UWP7 414 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 CCDC50Q8IVM0 306 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 TOP6BLQ8N6T0 577 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 SLC4A11Q8NBS3 891 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 SENP6Q9GZR1 1112 aaPredicted RBP6.38□□□□□ -1.39
VPS50-205ENST00000441602 ELOVL4Q9GZR5 314 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 GOLPH3Q9H4A6 298 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS50-205ENST00000441602 USTQ9Y2C2 406 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 CASP8AP2Q9UKL3 1982 aa6.38□□□□□ -1.39
VPS50-205ENST00000441602 KPNA7A9QM74 516 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GOLGA8SH3BPF8 625 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 PHF2O75151 1096 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 MICAL2O94851 1124 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 THP07101 528 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 KRT7P08729 469 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 AKAP5P24588 427 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 LRPAP1P30533 357 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GRK4P32298 578 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GUCY2FP51841 1108 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 CDH8P55286 799 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 MAMLD1Q13495 774 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ZBTB6Q15916 424 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GOLGA7BQ2TAP0 167 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 XKR4Q5GH76 650 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ARHGAP17Q68EM7 881 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 CCNI2Q6ZMN8 369 aaPredicted RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 SYDE1Q6ZW31 735 aaPredicted RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 ZDHHC17Q8IUH5 632 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 RCOR2Q8IZ40 523 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 TMEM86AQ8N2M4 240 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 SPATA18Q8TC71 538 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 WHAMMQ8TF30 809 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 MAGOHBQ96A72 148 aaKnown RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 LRRC45Q96CN5 670 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 UROC1Q96N76 676 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 LRRC1Q9BTT6 524 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 FAM129AQ9BZQ8 928 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ERVK-5Q9HDB9 667 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ASNSD1Q9NWL6 643 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GDAP2Q9NXN4 497 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 MGAMO43451 1857 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 SIGLEC16A6NMB1 481 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 O00370 1275 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 PODXLO00592 558 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ZRANB2O95218 330 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS50-205ENST00000441602 KRT1P04264 644 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 INHAP05111 366 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 KRT3P12035 628 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 PSMA2P25787 234 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GNL1P36915 607 aaPredicted RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 GSCP56915 257 aaPredicted RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 COPS2P61201 443 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GUCY2DQ02846 1103 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 LMNB2Q03252 620 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 BFSP2Q13515 415 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 GLRA4Q5JXX5 417 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 MAP3K21Q5TCX8 1036 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 OR6B2Q6IFH4 312 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 DSTYKQ6XUX3 929 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 CEP128Q6ZU80 1094 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 SLC13A5Q86YT5 568 aaPredicted RBP6.37□□□□□ -1.39
VPS50-205ENST00000441602 EXD1Q8NHP7 514 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 URGCPQ8TCY9 931 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 FNIP1Q8TF40 1166 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 PNKPQ96T60 521 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 VIPAS39Q9H9C1 493 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 CYLDQ9NQC7 956 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 STARD7Q9NQZ5 370 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 ST7Q9NRC1 585 aa6.37□□□□□ -1.39
VPS50-205ENST00000441602 KLK14Q9P0G3 267 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms