RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), human

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2F-213	ENST00000439780	KRT39	Q6A163	491 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	CES5A	Q6NT32	575 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	DPH6	Q7L8W6	267 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	FRMD5	Q7Z6J6	570 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	THEM5	Q8N1Q8	247 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	TMEM86A	Q8N2M4	240 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	SMG7	Q92540	1137 aa	Known RBP	11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	ACBD6	Q9BR61	282 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	HCFC1R1	Q9NWW0	138 aa		11.22	□□□□□ -0.61
UBE2F-213	ENST00000439780	TTC28	Q96AY4	2481 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	DOCK6	Q96HP0	2047 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	MYBPHL	A2RUH7	354 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	C19orf67	A6NJJ6	358 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	PRRG1	O14668	218 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	TACC1	O75410	805 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	HNRNPA1	P09651	372 aa	Known RBP eCLIP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	SP100	P23497	879 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	HOXA9	P31269	272 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	ELF1	P32519	619 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	GNL1	P36915	607 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	LHX1	P48742	406 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	MXI1	P50539	228 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	MARS	P56192	900 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	PSMC1	P62191	440 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	TNNC1	P63316	161 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	ZNF667	Q5HYK9	610 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	INTS6L	Q5JSJ4	861 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	ELMSAN1	Q6PJG2	1045 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	SCARA5	Q6ZMJ2	495 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	CCDC149	Q6ZUS6	474 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	GRASP	Q7Z6J2	395 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	TRIM59	Q8IWR1	403 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	ADHFE1	Q8IWW8	467 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	SPATA18	Q8TC71	538 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	TAF4B	Q92750	862 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	RIPOR3	Q96MK2	946 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	UHRF1	Q96T88	793 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	PHF7	Q9BWX1	381 aa	Predicted RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	RHOBTB2	Q9BYZ6	727 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	DPEP3	Q9H4B8	488 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	METTL14	Q9HCE5	456 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	CRTAC1	Q9NQ79	661 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	CEP72	Q9P209	647 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	DNMT3B	Q9UBC3	853 aa	Known RBP	11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	GTF3C4	Q9UKN8	822 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	FAM50B	Q9Y247	325 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	COQ4	Q9Y3A0	265 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	INSL5	Q9Y5Q6	135 aa		11.21	□□□□□ -0.61
UBE2F-213	ENST00000439780	LOC730098	B7Z3J9	87 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	NRG2	O14511	850 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	STX10	O60499	249 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	N4BP1	O75113	896 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	FAM163B	P0C2L3	166 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	ERCC5	P28715	1186 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	ASPA	P45381	313 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	MYL7	Q01449	175 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	TWF1	Q12792	350 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	CAVIN1	Q6NZI2	390 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	FAM171B	Q6P995	826 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	POTEH	Q6S545	545 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	CYP26C1	Q6V0L0	522 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	RTL10	Q7L3V2	364 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	DCP1B	Q8IZD4	617 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	FBXL13	Q8NEE6	735 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	OR6B3	Q8NGW1	331 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	TATDN2	Q93075	761 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	RPGRIP1	Q96KN7	1286 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	NECTIN4	Q96NY8	510 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	SYT15	Q9BQS2	421 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	BCO2	Q9BYV7	579 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	DNAJC25	Q9H1X3	360 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	PIDD1	Q9HB75	910 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	WDR6	Q9NNW5	1121 aa	Known RBP	11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	RAB20	Q9NX57	234 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	PRKAG3	Q9UGI9	489 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	MAFF	Q9ULX9	164 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	YIPF1	Q9Y548	306 aa		11.2	□□□□□ -0.62
UBE2F-213	ENST00000439780	NOTCH4	Q99466	2003 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	CLUH	O75153	1309 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	C2CD4D	B7Z1M9	353 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	GNA14	O95837	355 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	LRG1	P02750	347 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	POU2F2	P09086	479 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	HAPLN1	P10915	354 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	PCSK1	P29120	753 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	HOXD11	P31277	338 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	FMO5	P49326	533 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	GPR15	P49685	360 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	NOP14	P78316	857 aa	Known RBP	11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	TSPY1	Q01534	308 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	KCNH2	Q12809	1159 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	ORC1	Q13415	861 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	HS6ST3	Q8IZP7	471 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	LMO3	Q8TAP4	145 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	KHSRP	Q92945	711 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	3e-8	■■■□□ 17.9
UBE2F-213	ENST00000439780	CNOT6L	Q96LI5	555 aa	Known RBP	11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	SNX25	Q9H3E2	840 aa		11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	ABI2	Q9NYB9	513 aa	Predicted RBP	11.19	□□□□□ -0.62
UBE2F-213	ENST00000439780	HMGXB4	Q9UGU5	601 aa		11.19	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms