RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 WHAMMQ8TF30 809 aa13.52□□□□□ -0.25
SCLT1-202ENST00000439369 TMEM176AQ96HP8 235 aa13.52□□□□□ -0.25
SCLT1-202ENST00000439369 VN1R3Q9BXE9 311 aa13.52□□□□□ -0.25
SCLT1-202ENST00000439369 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.52□□□□□ -0.25
SCLT1-202ENST00000439369 DDX43Q9NXZ2 648 aaKnown RBP13.52□□□□□ -0.25
SCLT1-202ENST00000439369 YBX2Q9Y2T7 364 aaKnown RBP13.52□□□□□ -0.25
SCLT1-202ENST00000439369 BACE2Q9Y5Z0 518 aa13.52□□□□□ -0.25
SCLT1-202ENST00000439369 TBC1D4O60343 1298 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 URODP06132 367 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 VDRP11473 427 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 CLCN1P35523 988 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 USP8P40818 1118 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 GLUD2P49448 558 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 PDE6CP51160 858 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 ADKP55263 362 aaKnown RBP13.51□□□□□ -0.25
SCLT1-202ENST00000439369 TSPY1Q01534 308 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 SMARCB1Q12824 385 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 KIAA1841Q6NSI8 718 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 OSTM1Q86WC4 334 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 SLC4A11Q8NBS3 891 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 LMAN2LQ9H0V9 348 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 SLC28A3Q9HAS3 691 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 MTRRQ9UBK8 725 aa13.51□□□□□ -0.25
SCLT1-202ENST00000439369 TMEM265A0A087WTH1 108 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 SSU72P8A0A1W2PR75 194 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CYP26A1O43174 497 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 MED7O43513 233 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 NRDCO43847 1150 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 C1RP00736 705 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CTSAP10619 480 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 MYOGP15173 224 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CYP11B1P15538 503 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 DNAJB2P25686 324 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 PBX2P40425 430 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 KLHL30Q0D2K2 578 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CTXN3Q4LDR2 81 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 SGO2Q562F6 1265 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 INTS6LQ5JSJ4 861 aaKnown RBP13.5□□□□□ -0.25
SCLT1-202ENST00000439369 RTP2Q5QGT7 225 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 PRPF38BQ5VTL8 546 aaKnown RBP13.5□□□□□ -0.25
SCLT1-202ENST00000439369 KIAA0319Q5VV43 1072 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 PPP2R2DQ66LE6 453 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 ARHGAP17Q68EM7 881 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 SLC8B1Q6J4K2 584 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CCDC186Q7Z3E2 898 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 CEP57Q86XR8 500 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 TMTC1Q8IUR5 882 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 DCP1BQ8IZD4 617 aaKnown RBP13.5□□□□□ -0.25
SCLT1-202ENST00000439369 VPS52Q8N1B4 723 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 EPS8L1Q8TE68 723 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 RTP3Q9BQQ7 232 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 SYT15Q9BQS2 421 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 C17orf80Q9BSJ5 609 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 ZBP1Q9H171 429 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 NKX2-4Q9H2Z4 354 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 MRPL17Q9NRX2 175 aaKnown RBP13.5□□□□□ -0.25
SCLT1-202ENST00000439369 FNIP2Q9P278 1114 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 TIMM13Q9Y5L4 95 aaPredicted RBP13.5□□□□□ -0.25
SCLT1-202ENST00000439369 IRAK3Q9Y616 596 aa13.5□□□□□ -0.25
SCLT1-202ENST00000439369 NLRC5Q86WI3 1866 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 GBF1Q92538 1859 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 H3BNC9 293 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 PTMAP06454 111 aaKnown RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 PNMA6AP0CW24 399 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 PTPN1P18031 435 aaKnown RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 LMO2P25791 158 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 GNA15P30679 374 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 CDR2Q01850 454 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 CNGA2Q16280 664 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 PSMD5Q16401 504 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 NFE2Q16621 373 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 E4F1Q66K89 784 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 HGSNATQ68CP4 663 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 FAM171BQ6P995 826 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 WDR59Q6PJI9 974 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 CYP26C1Q6V0L0 522 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 TRIM72Q6ZMU5 477 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 TAS1R1Q7RTX1 841 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 ACOT1Q86TX2 421 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 LNX1Q8TBB1 728 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 MYCBPAPQ8TBZ2 947 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 SPPL3Q8TCT6 385 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 C2orf15Q8WU43 125 aaKnown RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 RIN2Q8WYP3 895 aaPredicted RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 TIFAQ96CG3 184 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 HEXIM2Q96MH2 286 aaKnown RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 TWNKQ96RR1 684 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 PKMYT1Q99640 499 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 SYT11Q9BT88 431 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 ZCWPW1Q9H0M4 648 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 RXFP1Q9HBX9 757 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 ABCB6Q9NP58 842 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 NGRNQ9NPE2 291 aaKnown RBP13.49□□□□□ -0.25
SCLT1-202ENST00000439369 HMGXB4Q9UGU5 601 aa13.49□□□□□ -0.25
SCLT1-202ENST00000439369 NOCTQ9UK39 431 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms