RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 HVCN1Q96D96 273 aa19.61■□□□□ 0.73
GTF3A-204ENST00000438571 FAM213AQ9BRX8 229 aa19.61■□□□□ 0.73
GTF3A-204ENST00000438571 MRPL44Q9H9J2 332 aaKnown RBP19.61■□□□□ 0.73
GTF3A-204ENST00000438571 SRPRBQ9Y5M8 271 aaKnown RBP19.61■□□□□ 0.73
GTF3A-204ENST00000438571 SDK1Q7Z5N4 2213 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 GOLGA8IPA6NC78 632 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 GOLGA8JA6NMD2 632 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 SPECC1L-ADORA2AF8WAN1 911 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 HCRTO43612 131 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 GCNT3O95395 438 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 SYT1P21579 422 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 POLR2BP30876 1174 aaKnown RBP19.6■□□□□ 0.73
GTF3A-204ENST00000438571 CTHP32929 405 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 KPNA1P52294 538 aaPredicted RBP19.6■□□□□ 0.73
GTF3A-204ENST00000438571 L1TD1Q5T7N2 865 aaKnown RBP19.6■□□□□ 0.73
GTF3A-204ENST00000438571 SDHAF4Q5VUM1 108 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 RRAGBQ5VZM2 374 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 TMEM150AQ86TG1 271 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 ITIH5Q86UX2 942 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 BRSK2Q8IWQ3 736 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 RIN3Q8TB24 985 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 E2F7Q96AV8 911 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 USP28Q96RU2 1077 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 PARD6AQ9NPB6 346 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 HSFX1Q9UBD0 423 aa19.6■□□□□ 0.73
GTF3A-204ENST00000438571 KPNA7A9QM74 516 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 ITGB3P05106 788 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 HAPLN1P10915 354 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-204ENST00000438571 ABCD1P33897 745 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 SRSF5Q13243 272 aaKnown RBP19.59■□□□□ 0.73
GTF3A-204ENST00000438571 RSPO4Q2I0M5 234 aaPredicted RBP19.59■□□□□ 0.73
GTF3A-204ENST00000438571 DGLUCYQ7Z3D6 616 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 METTL23Q86XA0 190 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 C1orf127Q8N9H9 656 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 CXorf38Q8TB03 319 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 CBWD1Q9BRT8 395 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 SLC46A2Q9BY10 475 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 PANK2Q9BZ23 570 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 TASP1Q9H6P5 420 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 DLL3Q9NYJ7 618 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 CCDC39Q9UFE4 941 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 DSEQ9UL01 958 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 L1RE1Q9UN81 338 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 MYOFQ9NZM1 2061 aa19.59■□□□□ 0.73
GTF3A-204ENST00000438571 MYBPHLA2RUH7 354 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 DPYSL4O14531 572 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 IDEP14735 1019 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 HMGA1P17096 107 aaKnown RBP19.58■□□□□ 0.72
GTF3A-204ENST00000438571 TGM1P22735 817 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 PAX3P23760 479 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 ACAT1P24752 427 aaKnown RBP19.58■□□□□ 0.72
GTF3A-204ENST00000438571 TUFMP49411 452 aaKnown RBP19.58■□□□□ 0.72
GTF3A-204ENST00000438571 CCR3P51677 355 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 TFAMQ00059 246 aaKnown RBP19.58■□□□□ 0.72
GTF3A-204ENST00000438571 VEPH1Q14D04 833 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 PON2Q15165 354 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 SV2CQ496J9 727 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 ARHGAP15Q53QZ3 475 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 LMBRD2Q68DH5 695 aaPredicted RBP19.58■□□□□ 0.72
GTF3A-204ENST00000438571 SV2BQ7L1I2 683 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 OSTM1Q86WC4 334 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 THEM5Q8N1Q8 247 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 GLIS3Q8NEA6 775 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 SPPL2BQ8TCT7 592 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 BPIFB1Q8TDL5 484 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 ZNF560Q96MR9 790 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 ACCSQ96QU6 501 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 PI4K2AQ9BTU6 479 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 PCIF1Q9H4Z3 704 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 SEL1LQ9UBV2 794 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 AGAP1Q9UPQ3 857 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 MTMR6Q9Y217 621 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 CCL26Q9Y258 94 aa19.58■□□□□ 0.72
GTF3A-204ENST00000438571 MYH10P35580 1976 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 SPTBN2O15020 2390 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 FRMD3A2A2Y4 597 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 CHURC1-FNTBB4DL54 471 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 K7ESF4 209 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 TADA3O75528 432 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 PRPF6O94906 941 aaKnown RBP19.57■□□□□ 0.72
GTF3A-204ENST00000438571 IL18RAPO95256 599 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 GAP43P17677 238 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 FNTBP49356 437 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 ARHGAP29Q52LW3 1261 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 PDCL2Q8N4E4 241 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 NOC3LQ8WTT2 800 aaKnown RBP19.57■□□□□ 0.72
GTF3A-204ENST00000438571 CHFRQ96EP1 664 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 IER2Q9BTL4 223 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 C8orf33Q9H7E9 229 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-204ENST00000438571 OBP2AQ9NY56 170 aa19.57■□□□□ 0.72
GTF3A-204ENST00000438571 RBAKQ9NYW8 714 aaPredicted RBP19.57■□□□□ 0.72
GTF3A-204ENST00000438571 PTPRJQ12913 1337 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 F11P03951 625 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 CDC25CP30307 473 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 STAT6P42226 847 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 CXCL12P48061 93 aa19.56■□□□□ 0.72
GTF3A-204ENST00000438571 MLLT6P55198 1093 aaPredicted RBP19.56■□□□□ 0.72
GTF3A-204ENST00000438571 POU5F1Q01860 360 aaKnown RBP19.56■□□□□ 0.72
GTF3A-204ENST00000438571 BFSP1Q12934 665 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms